RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ACANP16112 2415 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 ABCA4P78363 2273 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 FAM221AA4D161 298 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 CLCA1A8K7I4 914 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 TMEM114B3SHH9 223 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 PDPK1O15530 556 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 EEF1E1O43324 174 aaKnown RBP10.83□□□□□ -0.68
MED28-203ENST00000503945 SCO2O43819 266 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 SPAG7O75391 227 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 IFI6P09912 130 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 NUDT17P0C025 328 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 HK1P19367 917 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 TCEA1P23193 301 aaKnown RBP10.83□□□□□ -0.68
MED28-203ENST00000503945 ASMTP46597 345 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 HSPB3Q12988 150 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 PCLAFQ15004 111 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 DAZAP2Q15038 168 aaPredicted RBP10.83□□□□□ -0.68
MED28-203ENST00000503945 GLYR1Q49A26 553 aaPredicted RBP10.83□□□□□ -0.68
MED28-203ENST00000503945 FBXW10Q5XX13 1052 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 KANK2Q63ZY3 851 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 LRIG3Q6UXM1 1119 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 P4HA3Q7Z4N8 544 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 MARCH3Q86UD3 253 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 TRABD2AQ86V40 505 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 TGIF2LYQ8IUE0 185 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 GRAMD2AQ8IUY3 354 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 MEIOBQ8N635 442 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 CDRT4Q8N9R6 151 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 C9orf106Q8NAJ2 232 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 TCP10LQ8TDR4 215 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 RNF138Q8WVD3 245 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 CIDECQ96AQ7 238 aaPredicted RBP10.83□□□□□ -0.68
MED28-203ENST00000503945 MTERF3Q96E29 417 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 CCT7Q99832 543 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 FOXC2Q99958 501 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 SH3GL2Q99962 352 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 SFXN3Q9BWM7 321 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 TBL1XR1Q9BZK7 514 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 CLEC4MQ9H2X3 399 aaPredicted RBP10.83□□□□□ -0.68
MED28-203ENST00000503945 TUBB1Q9H4B7 451 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 RASSF1Q9NS23 344 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 ACSS1Q9NUB1 689 aaPredicted RBP10.83□□□□□ -0.68
MED28-203ENST00000503945 JKAMPQ9P055 326 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 PTGDR2Q9Y5Y4 395 aa10.83□□□□□ -0.68
MED28-203ENST00000503945 CASKO14936 926 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 LSM1O15116 133 aaKnown RBP10.82□□□□□ -0.68
MED28-203ENST00000503945 TBX19O60806 448 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 SLU7O95391 586 aaKnown RBP10.82□□□□□ -0.68
MED28-203ENST00000503945 UTS2O95399 124 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 PSMG1O95456 288 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 HPGDP15428 266 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 ZNF708P17019 499 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 MAPK1P28482 360 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 SERPINB5P36952 375 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 DIO3P55073 304 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 CLDN18P56856 261 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 RPL38P63173 70 aaKnown RBP10.82□□□□□ -0.68
MED28-203ENST00000503945 FOXF2Q12947 444 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 STX5Q13190 355 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 GANABQ14697 944 aaKnown RBP10.82□□□□□ -0.68
MED28-203ENST00000503945 UGT3A2Q3SY77 523 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 FLYWCH1Q4VC44 716 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 OR2A2Q6IF42 318 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 ANKRD26P1Q6NSI1 321 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 EMBQ6PCB8 327 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 ZCCHC12Q6PEW1 402 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 ADGRE4PQ86SQ3 457 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 EXOC3L1Q86VI1 746 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 FADS6Q8N9I5 356 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 NUP43Q8NFH3 380 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 OR2M3Q8NG83 312 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 OR2T11Q8NH01 316 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 LINC01560Q8TB33 94 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 TWIST2Q8WVJ9 160 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 SLC9A6Q92581 669 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 ZNF764Q96H86 408 aaPredicted RBP10.82□□□□□ -0.68
MED28-203ENST00000503945 PPP3R2Q96LZ3 170 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 PRPF18Q99633 342 aaKnown RBP10.82□□□□□ -0.68
MED28-203ENST00000503945 PIGQQ9BRB3 760 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 RBM24Q9BX46 236 aaKnown RBP10.82□□□□□ -0.68
MED28-203ENST00000503945 PIGMQ9H3S5 423 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 EQTNQ9NQ60 294 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 MKS1Q9NXB0 559 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 SLC17A7Q9P2U7 560 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 ZNF337Q9Y3M9 751 aa10.82□□□□□ -0.68
MED28-203ENST00000503945 GXYLT2A0PJZ3 443 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 A6NNC1 897 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 EMC8O43402 210 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 PEX11AO75192 247 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 TNFRSF21O75509 655 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 SOX30O94993 753 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 ANGPTL1O95841 491 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 CRHP06850 196 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 CHRNGP07510 517 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 ALOX5P09917 674 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 BCKDHAP12694 445 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 SDC1P18827 310 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 KLK2P20151 261 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 RPL3P39023 403 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms