RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 LAMP1P11279 417 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 POU3F2P20265 443 aaPredicted RBP16.58■□□□□ 0.24
RNF4-204ENST00000503659 LHX2P50458 406 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 ZNF136P52737 540 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 PRKAG1P54619 331 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 DLX5P56178 289 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 MLC1Q15049 377 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 SF3B4Q15427 424 aaKnown RBP eCLIP16.58■□□□□ 0.241e-7■□□□□ 8.2
RNF4-204ENST00000503659 EXOSC6Q5RKV6 272 aaKnown RBP16.58■□□□□ 0.24
RNF4-204ENST00000503659 IL23RQ5VWK5 629 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 MFSD12Q6NUT3 480 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 R3HCC1LQ7Z5L2 792 aaKnown RBP16.58■□□□□ 0.24
RNF4-204ENST00000503659 CDH24Q86UP0 819 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 ZNF781Q8N8C0 355 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 FNDC5Q8NAU1 212 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 OR2M3Q8NG83 312 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 MBD3L2Q8NHZ7 208 aaPredicted RBP16.58■□□□□ 0.24
RNF4-204ENST00000503659 PPP1R14CQ8TAE6 165 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 FBXO30Q8TB52 745 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 RMND5BQ96G75 393 aaPredicted RBP16.58■□□□□ 0.24
RNF4-204ENST00000503659 TRIB1Q96RU8 372 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 TUBA1CQ9BQE3 449 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 G6PC3Q9BUM1 346 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 CENPHQ9H3R5 247 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 DKKL1Q9UK85 242 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 CELSR1Q9NYQ6 3014 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 AKAP9Q99996 3911 aa16.58■□□□□ 0.24
RNF4-204ENST00000503659 ANKHD1Q8IWZ3 2542 aaKnown RBP16.57■□□□□ 0.24
RNF4-204ENST00000503659 UTS2O95399 124 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 TCEA1P23193 301 aaKnown RBP16.57■□□□□ 0.24
RNF4-204ENST00000503659 DPP4P27487 766 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 GCKP35557 465 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 PEX19P40855 299 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 RFX3P48380 749 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 STARP49675 285 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 B3GALT5-AS1P59052 145 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 ABCE1P61221 599 aaKnown RBP16.57■□□□□ 0.24
RNF4-204ENST00000503659 STX5Q13190 355 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 DUSP5Q16690 384 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 APOOLQ6UXV4 268 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 SZRD1Q7Z422 152 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 ADGRE4PQ86SQ3 457 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 KRTCAP2Q8N6L1 136 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 CDRT4Q8N9R6 151 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 C9orf106Q8NAJ2 232 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 OR4K17Q8NGC6 315 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 CEP70Q8NHQ1 597 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 ZPLD1Q8TCW7 415 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 GPR151Q8TDV0 419 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 TUBGCP3Q96CW5 907 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 FAM120BQ96EK7 910 aaKnown RBP16.57■□□□□ 0.24
RNF4-204ENST00000503659 PGM2Q96G03 612 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 SORT1Q99523 831 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 ZNF559Q9BR84 538 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 DSN1Q9H410 356 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 CALHM2Q9HA72 323 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 C3orf14Q9HBI5 128 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 MRTO4Q9UKD2 239 aaKnown RBP16.57■□□□□ 0.24
RNF4-204ENST00000503659 RPH3AQ9Y2J0 694 aaPredicted RBP16.57■□□□□ 0.24
RNF4-204ENST00000503659 ACTL7BQ9Y614 415 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 HIVEP1P15822 2718 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 MED12LQ86YW9 2145 aa16.57■□□□□ 0.24
RNF4-204ENST00000503659 NUP214P35658 2090 aaPredicted RBP16.57■□□□□ 0.24
RNF4-204ENST00000503659 EMC8O43402 210 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 KCNH1O95259 989 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 TUBBP07437 444 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 BMP5P22003 454 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 RPL3P39023 403 aaKnown RBP16.56■□□□□ 0.24
RNF4-204ENST00000503659 PSMD4P55036 377 aaKnown RBP16.56■□□□□ 0.24
RNF4-204ENST00000503659 DSCR4P56555 118 aaPredicted RBP16.56■□□□□ 0.24
RNF4-204ENST00000503659 CLDN18P56856 261 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 PDCD2Q16342 344 aaPredicted RBP16.56■□□□□ 0.24
RNF4-204ENST00000503659 GRAMD1BQ3KR37 738 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 VPS26BQ4G0F5 336 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 ENPP6Q6UWR7 440 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 PLXDC2Q6UX71 529 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 ZAR1Q86SH2 424 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 GALNT10Q86SR1 603 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 MARCH3Q86UD3 253 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 RIMKLAQ8IXN7 391 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 SLC16A11Q8NCK7 471 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 SLC9A6Q92581 669 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 OTUB1Q96FW1 271 aaPredicted RBP16.56■□□□□ 0.24
RNF4-204ENST00000503659 C16orf58Q96GQ5 468 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 SFXN2Q96NB2 322 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 SH3GL2Q99962 352 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 MED11Q9P086 117 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 L3MBTL1Q9Y468 752 aa16.56■□□□□ 0.24
RNF4-204ENST00000503659 A0A1W2PRB8 838 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 H0Y3Z8 333 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 DVL2O14641 736 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 ZWINTO95229 277 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 IL2RAP01589 272 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 G6PDP11413 515 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 ZNF708P17019 499 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 DDX5P17844 614 aaKnown RBP16.55■□□□□ 0.24
RNF4-204ENST00000503659 CHMP24386 653 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 PRR5P85299 388 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 SRYQ05066 204 aa16.55■□□□□ 0.24
RNF4-204ENST00000503659 RCAN2Q14206 197 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms