RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CBX1P83916 185 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 IDI1Q13907 227 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 CD226Q15762 336 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 TAF3Q5VWG9 929 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 PNCKQ6P2M8 343 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 LRRC70Q7Z2Q7 622 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 TSEN54Q7Z6J9 526 aaKnown RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 CCDC71Q8IV32 467 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 AQP11Q8NBQ7 271 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 RAET1EQ8TD07 263 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 SPRYD4Q8WW59 207 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 ART4Q93070 314 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 CCT7Q99832 543 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 ST6GALNAC5Q9BVH7 336 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 TBC1D10AQ9BXI6 508 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 PUS3Q9BZE2 481 aaKnown RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 LIME1Q9H400 295 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 LRRC40Q9H9A6 602 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 IL1RL2Q9HB29 575 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 RBM28Q9NW13 759 aaKnown RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 THEGQ9P2T0 379 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 THAP10Q9P2Z0 257 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 RARRES3Q9UL19 164 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF346Q9UL40 294 aaKnown RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 SMC3Q9UQE7 1217 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 FBXO7Q9Y3I1 522 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 TNFRSF18Q9Y5U5 241 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 UNC13BO14795 1591 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 TMEM131LA2VDJ0 1609 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 KANK1Q14678 1352 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 TMEM2Q9UHN6 1383 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 PTCH1Q13635 1447 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 ADGRB3O60242 1522 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 IGLV7-46A0A075B6I9 117 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 PPIAL4CA0A0B4J2A2 164 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 TRGV8A0A0C4DH27 118 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 MEX3AA1L020 520 aaKnown RBP4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 GSAPA4D1B5 854 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 K7EQG2 157 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 SNAP91O60641 907 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 ADCY5O95622 1261 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 FCGR3AP08637 254 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 HOXB7P09629 217 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 CFC1P0CG37 223 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 PPIAL4GP0DN37 164 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 PTGER3P43115 390 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 HAND2P61296 217 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 UBE2HP62256 183 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 GSTO1P78417 241 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 EIF2B1Q14232 305 aaKnown RBP4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 NECTIN1Q15223 517 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 PRR5LQ6MZQ0 368 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 BTNL3Q6UXE8 466 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF679Q8IYX0 411 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 SSC4DQ8WTU2 575 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 DHTKD1Q96HY7 919 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 ART5Q96L15 291 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 FAM173AQ9BQD7 235 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 RBM4Q9BWF3 364 aaKnown RBP4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 GPN2Q9H9Y4 310 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 RNF14Q9UBS8 474 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 MGAT4AQ9UM21 535 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 EIF3LQ9Y262 564 aaKnown RBP4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 MRPS33Q9Y291 106 aaKnown RBP4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 LRP12Q9Y561 859 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 ROBO1Q9Y6N7 1651 aa4.38□□□□□ -1.71
HMGB1P3-201ENST00000502802 NWD1Q149M9 1564 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 IQGAP3Q86VI3 1631 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 PDHXO00330 501 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 NTN3O00634 580 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 CXCL11O14625 94 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 CASKO14936 926 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 DUX1O43812 170 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 NEBLO76041 1014 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 PBLDP30039 288 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 PPP2R1BP30154 601 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 PPT1P50897 306 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 RIDAP52758 137 aaKnown RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF85Q03923 595 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 PJVKQ0ZLH3 352 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 CAMK4Q16566 473 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 CYBRD1Q53TN4 286 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 RUSC1-AS1Q66K80 236 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 APOOLQ6UXV4 268 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 HACD2Q6Y1H2 254 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 STOX1Q6ZVD7 989 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 USP43Q70EL4 1123 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 DPY19L4Q7Z388 723 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 LRRTM1Q86UE6 522 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 EIF1ADQ8N9N8 165 aaKnown RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF248Q8NDW4 579 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 HSD17B14Q9BPX1 270 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 RPP25Q9BUL9 199 aaKnown RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 BARHL1Q9BZE3 327 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 UPF3AQ9H1J1 476 aaKnown RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 VCX2Q9H322 139 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms