RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 FUT5Q11128 374 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 FADDQ13158 208 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 STX5Q13190 355 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 CYLC2Q14093 348 aaPredicted RBP12.98□□□□□ -0.33
RNF4-202ENST00000502316 CCNJQ5T5M9 372 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 GKAP1Q5VSY0 366 aaPredicted RBP12.98□□□□□ -0.33
RNF4-202ENST00000502316 ANGPTL8Q6UXH0 198 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 DHDDSQ86SQ9 333 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 TREML1Q86YW5 311 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 RP9Q8TA86 221 aaKnown RBP12.98□□□□□ -0.33
RNF4-202ENST00000502316 CPT1CQ8TCG5 803 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 PNPT1Q8TCS8 783 aaKnown RBP12.98□□□□□ -0.33
RNF4-202ENST00000502316 FAR1Q8WVX9 515 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 RAB8BQ92930 207 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 SDF2Q99470 211 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 OSBPL11Q9BXB4 747 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 ZNF350Q9GZX5 532 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 METTL7AQ9H8H3 244 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 ASF1BQ9NVP2 202 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 TUBA8Q9NY65 449 aaPredicted RBP12.98□□□□□ -0.33
RNF4-202ENST00000502316 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.98□□□□□ -0.33
RNF4-202ENST00000502316 NBASA2RRP1 2371 aa12.98□□□□□ -0.33
RNF4-202ENST00000502316 RELNP78509 3460 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 LOC100653049A0A140TA62 436 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 PRAMEF27A3QJZ7 478 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 LRRC3CA6NJW4 275 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 NPIPB9F8W1W9 429 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 FXYD1O00168 92 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 DCTN3O75935 186 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 KRT34O76011 436 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 UTS2O95399 124 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 BMP2P12643 396 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 ZNF24P17028 368 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 TBXA2RP21731 343 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 RFX3P48380 749 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 NFYCQ13952 458 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 RGNQ15493 299 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 TRMT5Q32P41 509 aaKnown RBP12.97□□□□□ -0.33
RNF4-202ENST00000502316 GRAMD1BQ3KR37 738 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 RUNDC3AQ59EK9 446 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 RNFT1Q5M7Z0 435 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
RNF4-202ENST00000502316 ATAD3BQ5T9A4 648 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 FNDC7Q5VTL7 733 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 FAM91A1Q658Y4 838 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 REP15Q6BDI9 236 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 PRICKLE2Q7Z3G6 844 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 GALNT10Q86SR1 603 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 SIAH3Q8IW03 269 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 OR4C3Q8NH37 302 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 NR4A3Q92570 626 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 ZNF597Q96LX8 424 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 ANKRD27Q96NW4 1050 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 CGREF1Q99674 301 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 SLX1AQ9BQ83 275 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 CPPED1Q9BRF8 314 aaPredicted RBP12.97□□□□□ -0.33
RNF4-202ENST00000502316 TTTY12Q9BZ98 90 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 RAD21L1Q9H4I0 556 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 IKZF5Q9H5V7 419 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 IL1RL2Q9HB29 575 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 GALNT9Q9HCQ5 603 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 ZFP64Q9NPA5 681 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 POLE3Q9NRF9 147 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 UBQLN4Q9NRR5 601 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 AGPAT4Q9NRZ5 378 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 THUMPD1Q9NXG2 353 aaKnown RBP12.97□□□□□ -0.33
RNF4-202ENST00000502316 KLRF1Q9NZS2 232 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 BOKQ9UMX3 212 aaPredicted RBP12.97□□□□□ -0.33
RNF4-202ENST00000502316 LIPT1Q9Y234 373 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 WIF1Q9Y5W5 379 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 SHANK1Q9Y566 2161 aa12.97□□□□□ -0.33
RNF4-202ENST00000502316 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
RNF4-202ENST00000502316 ALG1L2C9J202 215 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 STX11O75558 287 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.33
RNF4-202ENST00000502316 OXSR1O95747 527 aaPredicted RBP12.96□□□□□ -0.33
RNF4-202ENST00000502316 COX4I1P13073 169 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 ETFAP13804 333 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 GPX2P18283 190 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 ATP6V1C1P21283 382 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 ELAVL4P26378 380 aaKnown RBP12.96□□□□□ -0.33
RNF4-202ENST00000502316 CRATP43155 626 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 TDGF1P3P51864 188 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 DSTNP60981 165 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 TLE1Q04724 770 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 APOOLQ6UXV4 268 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 BNC2Q6ZN30 1099 aaPredicted RBP12.96□□□□□ -0.33
RNF4-202ENST00000502316 C16orf62Q7Z3J2 963 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 PACS2Q86VP3 889 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 OIT3Q8WWZ8 545 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 ROPN1LQ96C74 230 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 TRNT1Q96Q11 434 aaKnown RBP12.96□□□□□ -0.33
RNF4-202ENST00000502316 LRRC37BQ96QE4 947 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 HOXD1Q9GZZ0 328 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 SAP130Q9H0E3 1048 aa12.96□□□□□ -0.33
RNF4-202ENST00000502316 ZNF703Q9H7S9 590 aaPredicted RBP12.96□□□□□ -0.33
RNF4-202ENST00000502316 ZDHHC11Q9H8X9 412 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms