RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 UBQLN4Q9NRR5 601 aa14.65□□□□□ -0.06
SSBP1-214ENST00000498107 TUBA8Q9NY65 449 aaPredicted RBP14.65□□□□□ -0.06
SSBP1-214ENST00000498107 NINQ8N4C6 2090 aa14.65□□□□□ -0.06
SSBP1-214ENST00000498107 PRRC2CQ9Y520 2896 aaKnown RBP14.65□□□□□ -0.06
SSBP1-214ENST00000498107 TMEM247A6NEH6 219 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 EVPLLA8MZ36 301 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 CLIC1O00299 241 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 SHOX2O60902 331 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 TRIM3O75382 744 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 STX11O75558 287 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 FAM107AO95990 144 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 NPPAP01160 153 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 IGKV1D-16P01601 117 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 GUSBP08236 651 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 EDN3P14138 238 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 CRATP43155 626 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 PPIAP62937 165 aaKnown RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 FOXO1Q12778 655 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 FADDQ13158 208 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 CYLC2Q14093 348 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 GKAP1Q5VSY0 366 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 ZNF324BQ6AW86 544 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 HEPHL1Q6MZM0 1159 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 DHDDSQ86SQ9 333 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 ZNF527Q8NB42 609 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 PCYOX1LQ8NBM8 494 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 RP9Q8TA86 221 aaKnown RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 RNF138Q8WVD3 245 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 JSRP1Q96MG2 331 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 SLX1AQ9BQ83 275 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 PROK2Q9HC23 129 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 SLC6A13Q9NSD5 602 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 QPCTLQ9NXS2 382 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-214ENST00000498107 NTNG1Q9Y2I2 539 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 WIF1Q9Y5W5 379 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 GMEB1Q9Y692 573 aa14.64□□□□□ -0.07
SSBP1-214ENST00000498107 A0A0G2JMM0 328 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 A0A1W2PPB8 328 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 A0A1W2PRS3 328 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 KIR3DP1A8MWS1 328 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 HMGN4O00479 90 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 SCDO00767 359 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 FADS1O60427 444 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 DCTN3O75935 186 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 GLSO94925 669 aaPredicted RBP14.63□□□□□ -0.07
SSBP1-214ENST00000498107 ENDOUP21128 410 aaKnown RBP14.63□□□□□ -0.07
SSBP1-214ENST00000498107 TBXA2RP21731 343 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 CASP9P55211 416 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 NFYCQ13952 458 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 GNA13Q14344 377 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 GTDC1Q4AE62 458 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 FLYWCH1Q4VC44 716 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 CCNJQ5T5M9 372 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 BICRALQ6AI39 1079 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 TIGD3Q6B0B8 471 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 DESI1Q6ICB0 168 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 MISPQ8IVT2 679 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 FAM109AQ8N4B1 249 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 GALNT11Q8NCW6 608 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 OR1J4Q8NGS1 313 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 PNPT1Q8TCS8 783 aaKnown RBP14.63□□□□□ -0.07
SSBP1-214ENST00000498107 OIT3Q8WWZ8 545 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 RAB8BQ92930 207 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 MIB2Q96AX9 1013 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 SDF2Q99470 211 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 ARMCX1Q9P291 453 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 KCNE3Q9Y6H6 103 aa14.63□□□□□ -0.07
SSBP1-214ENST00000498107 SVILO95425 2214 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 LOC100653049A0A140TA62 436 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 A0A1W2PQD3 144 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 PINLYPA6NC86 204 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 ALG1L2C9J202 215 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 H3BNH8 94 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 SNPHO15079 494 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 KRT34O76011 436 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 HOXB9P17482 250 aaPredicted RBP14.62□□□□□ -0.07
SSBP1-214ENST00000498107 RFC3P40938 356 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 PTGDSP41222 190 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 DSTNP60981 165 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 ELOAQ14241 798 aaKnown RBP14.62□□□□□ -0.07
SSBP1-214ENST00000498107 RGNQ15493 299 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 GRAMD1BQ3KR37 738 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
SSBP1-214ENST00000498107 DLEU7Q6UYE1 221 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 SNX32Q86XE0 403 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 ANKS4BQ8N8V4 417 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 ST6GALNAC3Q8NDV1 305 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 PMM1Q92871 262 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 ROPN1LQ96C74 230 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 NTNG2Q96CW9 530 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 CMTM5Q96DZ9 223 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 AURKBQ96GD4 344 aaPredicted RBP14.62□□□□□ -0.07
SSBP1-214ENST00000498107 GPR137Q96N19 417 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 TRNT1Q96Q11 434 aaKnown RBP14.62□□□□□ -0.07
SSBP1-214ENST00000498107 CGREF1Q99674 301 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 SH3GL1Q99961 368 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 CCDC106Q9BWC9 280 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 ZNF350Q9GZX5 532 aa14.62□□□□□ -0.07
SSBP1-214ENST00000498107 GID8Q9NWU2 228 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms