RNA–Protein interactions for RNA: ENST00000498054.1

POLR1B-215, Transcript of RNA polymerase I subunit B, human

TSL 3

Gene POLR1B, Length 636 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1B-215	ENST00000498054	ZNF853	P0CG23	659 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	ARF4	P18085	180 aa	Predicted RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	CCNA2	P20248	432 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	MX1	P20591	662 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	IL10	P22301	178 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	RPA1	P27694	616 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	NPY2R	P49146	381 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	RAG2	P55895	527 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	BPIFB3	P59826	476 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	FKBP1A	P62942	108 aa	Known RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	MYBPC1	Q00872	1141 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	FCHO2	Q0JRZ9	810 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	RAPSN	Q13702	412 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	LY6D	Q14210	128 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	AGK	Q53H12	422 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	AGAP7P	Q5VUJ5	663 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	IL23R	Q5VWK5	629 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	RBM43	Q6ZSC3	357 aa	Known RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	COPS6	Q7L5N1	327 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	LUZP1	Q86V48	1076 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	ITPRIP	Q8IWB1	547 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	ZNF781	Q8N8C0	355 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	MRPL43	Q8N983	215 aa	Known RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	CHDH	Q8NE62	594 aa	Predicted RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	SSC4D	Q8WTU2	575 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	C11orf52	Q96A22	123 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	SYAP1	Q96A49	352 aa	Predicted RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	NABP1	Q96AH0	204 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	ZNF689	Q96CS4	500 aa	Predicted RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	SAMD8	Q96LT4	415 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	NLN	Q9BYT8	704 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	UBXN6	Q9BZV1	441 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	COA1	Q9GZY4	146 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	ATG10	Q9H0Y0	220 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	RNF41	Q9H4P4	317 aa	Predicted RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	YY1AP1	Q9H869	796 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	JPT2	Q9H910	190 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	CGN	Q9P2M7	1197 aa	Known RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	SEC14L4	Q9UDX3	406 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	ATG4B	Q9Y4P1	393 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	CPQ	Q9Y646	472 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	CACNA1F	O60840	1977 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	KMT2E	Q8IZD2	1858 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	COL11A1	P12107	1806 aa	Predicted RBP	3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	PARP14	Q460N5	1801 aa		3.54	□□□□□ -1.84
POLR1B-215	ENST00000498054	ZNF292	O60281	2723 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	SALL1	Q9NSC2	1324 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	CLRN2	A0PK11	232 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	TSPAN2	O60636	221 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PTBP3	O95758	552 aa	Known RBP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	HPR	P00739	348 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	CXCL10	P02778	98 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PTMA	P06454	111 aa	Known RBP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	ZCCHC18	P0CG32	403 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	FOSL2	P15408	326 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	HOXD10	P28358	340 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	SPR	P35270	261 aa	Predicted RBP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	MATK	P42679	507 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	SLC1A4	P43007	532 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	SLC7A2	P52569	658 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	ENPP2	Q13822	863 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	LRRC26	Q2I0M4	334 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	HKDC1	Q2TB90	917 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	UNC50	Q53HI1	259 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	TEX35	Q5T0J7	233 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	CCDC183	Q5T5S1	534 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	RAET1G	Q6H3X3	334 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	IRGC	Q6NXR0	463 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PAQR6	Q6TCH4	344 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	NUFIP2	Q7Z417	695 aa	Known RBP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	RPAIN	Q86UA6	219 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	SLC22A16	Q86VW1	577 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	CARM1	Q86X55	608 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	ERO1B	Q86YB8	467 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	CCDC71	Q8IV32	467 aa	Predicted RBP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	ZNF440	Q8IYI8	595 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	KRT222	Q8N1A0	295 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PYROXD2	Q8N2H3	581 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	COLGALT1	Q8NBJ5	622 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PRSS33	Q8NF86	280 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	ZNF397	Q8NF99	534 aa	Predicted RBP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PNPLA2	Q96AD5	504 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	ATF6B	Q99941	703 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	HSD3B7	Q9H2F3	369 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	TUBB1	Q9H4B7	451 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	C11orf49	Q9H6J7	331 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	HEXA-AS1	Q9H8Q6	139 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	NGB	Q9NPG2	151 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	SOHLH2	Q9NX45	425 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	GTSE1	Q9NYZ3	720 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	CNOT2	Q9NZN8	540 aa	Known RBP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	LHX3	Q9UBR4	397 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	IKZF3	Q9UKT9	509 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	RARRES3	Q9UL19	164 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	ZNF175	Q9Y473	711 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PRSS21	Q9Y6M0	314 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	CLCA3P	Q9Y6N3	262 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	SPEG	Q15772	3267 aa		3.53	□□□□□ -1.84
POLR1B-215	ENST00000498054	PTPRS	Q13332	1948 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms