RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ATP6V1C1P21283 382 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 MVDP53602 400 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 FBXW4P57775 412 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 MTPNP58546 118 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 DSTNP60981 165 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 RPP38P78345 283 aaKnown RBP18.42■□□□□ 0.54
CTSD-206ENST00000497544 MXRA7P84157 204 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 EFR3AQ14156 821 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 NTRK2Q16620 822 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 SLC22A10Q63ZE4 541 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 HACD2Q6Y1H2 254 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 DIO2Q92813 273 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 SIGLEC12Q96PQ1 595 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 HOPXQ9BPY8 73 aaPredicted RBP18.42■□□□□ 0.54
CTSD-206ENST00000497544 SLC39A3Q9BRY0 314 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 TIMMDC1Q9NPL8 285 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 LIPT1Q9Y234 373 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 OR6C70A6NIJ9 312 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 CD46P15529 392 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 TNFSF10P50591 281 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 ARHGAP11BQ3KRB8 267 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 DCST2Q5T1A1 773 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 CCNJQ5T5M9 372 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 GOLM1Q8NBJ4 401 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 OR8J3Q8NGG0 315 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 FAM110BQ8TC76 370 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 TMCO6Q96DC7 493 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 C5orf34Q96MH7 638 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 SDF2Q99470 211 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 ECSITQ9BQ95 431 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 IKZF5Q9H5V7 419 aa18.41■□□□□ 0.54
CTSD-206ENST00000497544 C15orf38-AP3S2A0A0A6YYH1 394 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 TRAV17A0A0B4J275 112 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 FXYD1O00168 92 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 UGT2B11O75310 529 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 NEURL1O76050 574 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 P04436 131 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 NR2F1P10589 423 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 CALB2P22676 271 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 CD97P48960 835 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 GPAT3Q53EU6 434 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 SLC25A25Q6KCM7 469 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 HEPHL1Q6MZM0 1159 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 ARPINQ7Z6K5 226 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 GALNT10Q86SR1 603 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 RBMXL3Q8N7X1 1067 aaKnown RBP18.4■□□□□ 0.54
CTSD-206ENST00000497544 MDS2Q8NDY4 140 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 CHDHQ8NE62 594 aaPredicted RBP18.4■□□□□ 0.54
CTSD-206ENST00000497544 MFRPQ9BY79 579 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 TRIM8Q9BZR9 551 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 P2RX2Q9UBL9 471 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 L3MBTL1Q9Y468 752 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 CSAG2Q9Y5P2 127 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 EXPH5Q8NEV8 1989 aa18.4■□□□□ 0.54
CTSD-206ENST00000497544 B2RBV5 119 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 STX11O75558 287 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 SLC25A12O75746 678 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 UBOX5O94941 541 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 IGKV1D-16P01601 117 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 SP1P08047 785 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 CYP4B1P13584 511 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 LCN1P31025 176 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 SELPLGQ14242 412 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 GNA13Q14344 377 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.39■□□□□ 0.53
CTSD-206ENST00000497544 ZNF766Q5HY98 468 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 GCNT6Q5T4J0 391 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 Q6ZS92 163 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 MDGA2Q7Z553 956 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 ZNF227Q86WZ6 799 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 TEX19Q8NA77 164 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 PSD4Q8NDX1 1056 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 OR10G3Q8NGC4 313 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 OR10A6Q8NH74 314 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 SPPL2AQ8TCT8 520 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 PAQR8Q8TEZ7 354 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 HGDQ93099 445 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 SECISBP2Q96T21 854 aaKnown RBP18.39■□□□□ 0.53
CTSD-206ENST00000497544 KLHL1Q9NR64 748 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 SACM1LQ9NTJ5 587 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 FBXO34Q9NWN3 711 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 NDE1Q9NXR1 346 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 CNIH4Q9P003 139 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 AP3M1Q9Y2T2 418 aa18.39■□□□□ 0.53
CTSD-206ENST00000497544 ZFHX3Q15911 3703 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 TNFRSF21O75509 655 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 UTS2O95399 124 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 BMP2P12643 396 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 SLC6A2P23975 617 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 ELAVL4P26378 380 aaKnown RBP18.38■□□□□ 0.53
CTSD-206ENST00000497544 CLK3P49761 638 aaKnown RBP18.38■□□□□ 0.53
CTSD-206ENST00000497544 PSME3P61289 254 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 HPCAP84074 193 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 SYPL1Q16563 259 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 CYP51A1Q16850 503 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 RABL3Q5HYI8 236 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 DESI1Q6ICB0 168 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 C16orf89Q6UX73 402 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 ANKFN1Q8N957 763 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 TMEM178AQ8NBL3 297 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms