RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 GXYLT2A0PJZ3 443 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 SH3D21A4FU49 640 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 SLC22A20A6NK97 555 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 SLC28A1O00337 649 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 AZIN1O14977 448 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 SEC14L5O43304 696 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 RGS14O43566 566 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 AKAP10O43572 662 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 GMFGO60234 142 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 TNFSF13O75888 250 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 UTS2O95399 124 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 IL33O95760 270 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 PEPDP12955 493 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 KRT4P19013 534 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 GABRA3P34903 492 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 CLK3P49761 638 aaKnown RBP11.7□□□□□ -0.54
FN1-226ENST00000496542 PSMD4P55036 377 aaKnown RBP11.7□□□□□ -0.54
FN1-226ENST00000496542 PPP2R2AP63151 447 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 GANABQ14697 944 aaKnown RBP11.7□□□□□ -0.54
FN1-226ENST00000496542 BCL2A1Q16548 175 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 SZRD1Q7Z422 152 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 MARCH3Q86UD3 253 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 TDRPQ86YL5 185 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 C10orf107Q8IVU9 208 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 MEIOBQ8N635 442 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 CLHC1Q8NHS4 586 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 LMF2Q9BU23 707 aaKnown RBP11.7□□□□□ -0.54
FN1-226ENST00000496542 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 TBL1XR1Q9BZK7 514 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 PTGES2Q9H7Z7 377 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 PPCSQ9HAB8 311 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 MID2Q9UJV3 735 aa11.7□□□□□ -0.54
FN1-226ENST00000496542 NUP214P35658 2090 aaPredicted RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 OR2M5A3KFT3 312 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 H0YC42 278 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 H3BML4 177 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.541e-9■□□□□ 11.1
FN1-226ENST00000496542 KCNH1O95259 989 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 RAF1P04049 648 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 NEFHP12036 1026 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 SDC1P18827 310 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 KLK2P20151 261 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 PRPH2P23942 346 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 PRKAG1P54619 331 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 TPD52P55327 224 aaPredicted RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 RPL38P63173 70 aaKnown RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 EEF1A1P68104 462 aaKnown RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 SIRPAP78324 504 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 KEAP1Q14145 624 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 PCLAFQ15004 111 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 KIAA0040Q15053 153 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 GRAMD1BQ3KR37 738 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 ZNF385BQ569K4 471 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 EEF1A1P5Q5VTE0 462 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 OR2A2Q6IF42 318 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 VWA1Q6PCB0 445 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 GALNT10Q86SR1 603 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 EIF1ADQ8N9N8 165 aaKnown RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 OR2T11Q8NH01 316 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 ZFP28Q8NHY6 868 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 FBXO30Q8TB52 745 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 GPR151Q8TDV0 419 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 DUSP19Q8WTR2 217 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 SMPDL3BQ92485 455 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 FIG4Q92562 907 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 PIK3R3Q92569 461 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 PPCDCQ96CD2 204 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 C1GALT1C1Q96EU7 318 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 METTL2AQ96IZ6 378 aaKnown RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 TSSK3Q96PN8 268 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 ALPK1Q96QP1 1244 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 CCT7Q99832 543 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 GATA5Q9BWX5 397 aaPredicted RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 PINK1Q9BXM7 581 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 IQCGQ9H095 443 aaKnown RBP11.69□□□□□ -0.54
FN1-226ENST00000496542 C3orf14Q9HBI5 128 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 ZNF337Q9Y3M9 751 aa11.69□□□□□ -0.54
FN1-226ENST00000496542 TLDC2A0PJX2 215 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 TTC36A6NLP5 189 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 A8MXE2 369 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 SHISA8B8ZZ34 492 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 GOSR1O95249 250 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 ATE1O95260 518 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 ANGPTL1O95841 491 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 CHEK2O96017 543 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 IGKV1D-16P01601 117 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 HRGP04196 525 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 CRHP06850 196 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 IFI6P09912 130 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 LINC00032P0C843 101 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 PRPS2P11908 318 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 EFNA1P20827 205 aaPredicted RBP11.68□□□□□ -0.54
FN1-226ENST00000496542 SUCLG1P53597 346 aaKnown RBP11.68□□□□□ -0.54
FN1-226ENST00000496542 CLDN15P56746 228 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 EEFSECP57772 596 aaKnown RBP11.68□□□□□ -0.54
FN1-226ENST00000496542 SLC18A2Q05940 514 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 GALNTL6Q49A17 601 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms