RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZCCHC12Q6PEW1 402 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 SZRD1Q7Z422 152 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 CROCCP2Q86T23 111 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 KIRREL3Q8IZU9 778 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 PPP1R14CQ8TAE6 165 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 RMND5BQ96G75 393 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-213ENST00000496347 ZIM3Q96PE6 472 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 UCN2Q96RP3 112 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 SH3GL2Q99962 352 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 ZNF559Q9BR84 538 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 ACBD3Q9H3P7 528 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 NEUROD4Q9HD90 331 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 ATAD3AQ9NVI7 634 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 BAIAP2L1Q9UHR4 511 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 ATP6V1HQ9UI12 483 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 FOXD3Q9UJU5 478 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-213ENST00000496347 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 IGLV3-32A0A0A0MS00 114 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 KDM4EB2RXH2 506 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-213ENST00000496347 B4DXG7 233 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 BIRC5O15392 142 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 CTIFO43310 598 aaKnown RBP14.26□□□□□ -0.13
HDAC4-213ENST00000496347 NKX2-2O95096 273 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 SERPINE1P05121 402 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 ZNF708P17019 499 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 LCN1P31025 176 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 GABRA3P34903 492 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 OPRM1P35372 400 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 ZNF136P52737 540 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 WNT3P56703 355 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 MYBPHQ13203 477 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 PTGR1Q14914 329 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 OR5M10Q6IEU7 315 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 MFSD12Q6NUT3 480 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 ADGRE4PQ86SQ3 457 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 NUDCD3Q8IVD9 361 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 TRIM42Q8IWZ5 723 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 NATD1Q8N6N6 113 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 FNDC5Q8NAU1 212 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 OR2M3Q8NG83 312 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 GPR151Q8TDV0 419 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 RNASE6Q93091 150 aaKnown RBP14.26□□□□□ -0.13
HDAC4-213ENST00000496347 GIMAP5Q96F15 307 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 TM9SF2Q99805 663 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 TUBA1CQ9BQE3 449 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 SFXN3Q9BWM7 321 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 TBL1XR1Q9BZK7 514 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 PTGES2Q9H7Z7 377 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 FLRT3Q9NZU0 649 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 ACTL7BQ9Y614 415 aa14.26□□□□□ -0.13
HDAC4-213ENST00000496347 NUP214P35658 2090 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-213ENST00000496347 LINC01387J3KSC0 135 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 EMC8O43402 210 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 PEX11AO75192 247 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 ZWINTO95229 277 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 UTS2O95399 124 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 HSPA4LO95757 839 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 CTSSP25774 331 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 RFX3P48380 749 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 CLDN18P56856 261 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 C21orf58P58505 322 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 STX5Q13190 355 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 MAD2L1Q13257 205 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-213ENST00000496347 BCL2A1Q16548 175 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.25□□□□□ -0.13
HDAC4-213ENST00000496347 C6orf136Q5SQH8 315 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 RAET1LQ5VY80 246 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 CES4AQ5XG92 561 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 NUP43Q8NFH3 380 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 GOT1L1Q8NHS2 421 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-213ENST00000496347 PSMA8Q8TAA3 256 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 WNT2BQ93097 391 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 C3orf30Q96M34 536 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 C1orf50Q9BV19 199 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 ASIC5Q9NY37 505 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 CLCF1Q9UBD9 225 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 ZDHHC2Q9UIJ5 367 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 ABCA4P78363 2273 aa14.25□□□□□ -0.13
HDAC4-213ENST00000496347 GXYLT2A0PJZ3 443 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 CLCA1A8K7I4 914 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 ESPNB1AK53 854 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 SYT5O00445 386 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 HCRTR2O43614 444 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 ZIC3O60481 467 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 MYZAPP0CAP1 466 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 DHRS4L1P0CG22 281 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 TMIGD3P0DMS9 266 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 PRPS1L1P21108 318 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 UQCRC1P31930 480 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 PRIM2P49643 509 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 DGKQP52824 942 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 DLX5P56178 289 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 B3GALT5-AS1P59052 145 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 CHI3L2Q15782 390 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 SMU1Q2TAY7 513 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 TNFAIP8L3Q5GJ75 292 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 EXOSC6Q5RKV6 272 aaKnown RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 CPTPQ5TA50 214 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 POMZP3Q6PJE2 187 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms