RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 CT45A9P0DMV2 189 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 NID1P14543 1247 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 CHMP24386 653 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 GALNSP34059 522 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 CNR2P34972 360 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 ZNF136P52737 540 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 RGS8P57771 180 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 TAS2R41P59536 307 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 CT45A2Q5DJT8 189 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 VWA2Q5GFL6 755 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 KCTD8Q6ZWB6 473 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 ZBTB44Q8NCP5 570 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 OR4K5Q8NGD3 323 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 ZNF578Q96N58 590 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 GPA33Q99795 319 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 DPYSL5Q9BPU6 564 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 SMOC1Q9H4F8 434 aa12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 TRIM45Q9H8W5 580 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-205ENST00000496323 H3BSA7 217 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PRAMEF2O60811 474 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CYP7B1O75881 506 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PRG2P13727 222 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 FBLP22087 321 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 NUP107P57740 925 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 GABARAPL2P60520 117 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 RHAGQ02094 409 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 TOP3AQ13472 1001 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PTGES3Q15185 160 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CNPY1Q3B7I2 92 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 ENTPD8Q5MY95 495 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 MRPL2Q5T653 305 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 YOD1Q5VVQ6 348 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 TMEM236Q5W0B7 351 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 QSOX2Q6ZRP7 698 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 ZNF321PQ8N8H1 164 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 ZSCAN1Q8NBB4 408 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 NAT6Q93015 286 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 DGCR14Q96DF8 476 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 DGCR6LQ9BY27 220 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 UCK2Q9BZX2 261 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 POLE3Q9NRF9 147 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 SLC22A11Q9NSA0 550 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CEPT1Q9Y6K0 416 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 A0A087WUU8 490 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CDHR4A6H8M9 788 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 C17orf105B2RV13 164 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PTGES3LE9PB15 166 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 SOX30O94993 753 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 TP53P04637 393 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CCNYL3P0C7X3 344 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 SP9P0CG40 484 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CKMT1AP12532 417 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 TNNI3P19429 210 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 MMP11P24347 488 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 RFX3P48380 749 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CRISP1P54107 249 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CXCR4P61073 352 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 TARDBPQ13148 414 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 BIKQ13323 160 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PMS2P3Q13401 168 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 ZNHIT3Q15649 155 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 NNATQ16517 81 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 XAF1Q6GPH4 301 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 BORAQ6PGQ7 559 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 LSRQ86X29 649 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 SLC38A9Q8NBW4 561 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 FAM81AQ8TBF8 368 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 IFI44Q8TCB0 444 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PMM1Q92871 262 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 SENP5Q96HI0 755 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 MCHR1Q99705 422 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PELOQ9BRX2 385 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 YIPF3Q9GZM5 350 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 POLR1BQ9H9Y6 1135 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 CACYBPQ9HB71 228 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 FANCEQ9HB96 536 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 PNO1Q9NRX1 252 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 ZNF226Q9NYT6 803 aa12.68□□□□□ -0.38
SPTBN1-205ENST00000496323 SCN2AQ99250 2005 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 ZAR1LA6NP61 321 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 PRKNO60260 465 aaPredicted RBP12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 ABCB7O75027 752 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 TIAF1O95411 115 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 CER1O95813 267 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 GUSBP08236 651 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 OSMP13725 252 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 GABRB1P18505 474 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 KRT20P35900 424 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 ESRRGP62508 458 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 FLYWCH1Q4VC44 716 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 EIPR1Q53HC9 387 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 MFSD4BQ5TF39 518 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 ARHGAP40Q5TG30 622 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 BROXQ5VW32 411 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 RABEPKQ7Z6M1 372 aa12.67□□□□□ -0.38
SPTBN1-205ENST00000496323 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms