RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 NUP43Q8NFH3 380 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 GOT1L1Q8NHS2 421 aaPredicted RBP21.98■■□□□ 1.11
HLA-C-209ENST00000495835 RNASE6Q93091 150 aaKnown RBP21.98■■□□□ 1.11
HLA-C-209ENST00000495835 WNT2BQ93097 391 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 ACBD3Q9H3P7 528 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 ZDHHC2Q9UIJ5 367 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 RAB21Q9UL25 225 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 KDM4EB2RXH2 506 aaPredicted RBP21.97■■□□□ 1.11
HLA-C-209ENST00000495835 H0Y3Z8 333 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 BIRC5O15392 142 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 RGS16O15492 202 aaPredicted RBP21.97■■□□□ 1.11
HLA-C-209ENST00000495835 SOX30O94993 753 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 ZNF708P17019 499 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 PRR5P85299 388 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 C17orf67Q0P5P2 114 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 MAD2L1Q13257 205 aaPredicted RBP21.97■■□□□ 1.11
HLA-C-209ENST00000495835 SMU1Q2TAY7 513 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 C6orf136Q5SQH8 315 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 OR5M10Q6IEU7 315 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 OR2M3Q8NG83 312 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 GPR151Q8TDV0 419 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 SFXN2Q96NB2 322 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 MS4A4EQ96PG1 132 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 SH3GL2Q99962 352 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 TUBA1CQ9BQE3 449 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 ATAD3AQ9NVI7 634 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 MED12Q93074 2177 aa21.97■■□□□ 1.11
HLA-C-209ENST00000495835 ANKRD17O75179 2603 aaKnown RBP21.96■■□□□ 1.11
HLA-C-209ENST00000495835 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 IGLV3-32A0A0A0MS00 114 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 SCAMP2O15127 329 aaKnown RBP21.96■■□□□ 1.11
HLA-C-209ENST00000495835 TM9SF1O15321 606 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 PEX11AO75192 247 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 RCBTB2O95199 551 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 HSPA4LO95757 839 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 NGFRP08138 427 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 PEPDP12955 493 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 ZNF844Q08AG5 666 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 MYBPHQ13203 477 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 KIRREL3Q8IZU9 778 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 CLHC1Q8NHS4 586 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 FAM110BQ8TC76 370 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 GIMAP5Q96F15 307 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 PRPF18Q99633 342 aaKnown RBP21.96■■□□□ 1.11
HLA-C-209ENST00000495835 DSN1Q9H410 356 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 GIN1Q9NXP7 522 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 JKAMPQ9P055 326 aa21.96■■□□□ 1.11
HLA-C-209ENST00000495835 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.96■■□□□ 1.113e-12■■□□□ 11.4
HLA-C-209ENST00000495835 V9GYY5 206 aaPredicted RBP21.96■■□□□ 1.11
HLA-C-209ENST00000495835 SCO2O43819 266 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 ARRB2P32121 409 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 CLDN18P56856 261 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 B3GALT5-AS1P59052 145 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 KRTAP10-9P60411 292 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 PSMA8Q8TAA3 256 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 PPP1R14CQ8TAE6 165 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 AGR3Q8TD06 166 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 DUSP19Q8WTR2 217 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 SFXN3Q9BWM7 321 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 TBL1XR1Q9BZK7 514 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 EQTNQ9NQ60 294 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.95■■□□□ 1.1
HLA-C-209ENST00000495835 ACTL7BQ9Y614 415 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 POLQO75417 2590 aa21.95■■□□□ 1.1
HLA-C-209ENST00000495835 KIAA1549Q9HCM3 1950 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 ANKHD1Q8IWZ3 2542 aaKnown RBP21.94■■□□□ 1.1
HLA-C-209ENST00000495835 A0A1W2PRB8 838 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 B4DXG7 233 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 UTS2O95399 124 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 TMIGD3P0DMS9 266 aaPredicted RBP21.94■■□□□ 1.1
HLA-C-209ENST00000495835 PRPS1L1P21108 318 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 KIR2DL3P43628 341 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 SERPINB4P48594 390 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 PRIM2P49643 509 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 DGKQP52824 942 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 PRKAG1P54619 331 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 WNT3P56703 355 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 EEFSECP57772 596 aaKnown RBP21.94■■□□□ 1.1
HLA-C-209ENST00000495835 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.94■■□□□ 1.1
HLA-C-209ENST00000495835 EXOSC6Q5RKV6 272 aaKnown RBP21.94■■□□□ 1.1
HLA-C-209ENST00000495835 MFSD12Q6NUT3 480 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 EXOC3L1Q86VI1 746 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 KIF18BQ86Y91 864 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 C9orf106Q8NAJ2 232 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 FNDC5Q8NAU1 212 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 SLC9A6Q92581 669 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 COQ8BQ96D53 544 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 C3orf30Q96M34 536 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 CLCF1Q9UBD9 225 aa21.94■■□□□ 1.1
HLA-C-209ENST00000495835 AKAP9Q99996 3911 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 GXYLT2A0PJZ3 443 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 CLCA1A8K7I4 914 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 HCRTR2O43614 444 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 ANGPTL1O95841 491 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 SERPINE1P05121 402 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 ALOX5P09917 674 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 TBXA2RP21731 343 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 UQCRC1P31930 480 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 STARP49675 285 aa21.93■■□□□ 1.1
HLA-C-209ENST00000495835 DIO3P55073 304 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms