RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PGM1P36871 562 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 CLK3P49761 638 aaKnown RBP11.46□□□□□ -0.57
SNX17-208ENST00000493711 GSK3BP49841 420 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 HLCSP50747 726 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 GZMMP51124 257 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 NCALDP61601 193 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 CXADRP78310 365 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 MFAP5Q13361 173 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 SCARB2Q14108 478 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 ADRM1Q16186 407 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 ZSWIM7Q19AV6 140 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 VMACQ2NL98 169 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 GPAT3Q53EU6 434 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 WDR53Q7Z5U6 358 aaPredicted RBP11.46□□□□□ -0.57
SNX17-208ENST00000493711 PATL1Q86TB9 770 aaKnown RBP11.46□□□□□ -0.57
SNX17-208ENST00000493711 ZNF527Q8NB42 609 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 SLC38A5Q8WUX1 472 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 PIK3R3Q92569 461 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 TMBIM1Q969X1 311 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 TMCO6Q96DC7 493 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 SPACA9Q96E40 222 aaPredicted RBP11.46□□□□□ -0.57
SNX17-208ENST00000493711 OMA1Q96E52 524 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 ZNF607Q96SK3 696 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 SDF2Q99470 211 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 UTP23Q9BRU9 249 aaKnown RBP11.46□□□□□ -0.57
SNX17-208ENST00000493711 ZNF350Q9GZX5 532 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 SAP130Q9H0E3 1048 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 HPF1Q9NWY4 346 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 CD300AQ9UGN4 299 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 WDR45Q9Y484 360 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.46□□□□□ -0.57
SNX17-208ENST00000493711 CELSR3Q9NYQ7 3312 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 GXYLT2A0PJZ3 443 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 PRORSD1PA6NEY8 169 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 A6NL46 340 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 GSC2O15499 205 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 TSPAN2O60636 221 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 SERPINB7O75635 380 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 DNAJB5O75953 348 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 BCHEP06276 602 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ETS2P15036 469 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ME2P23368 584 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 CYB561P49447 251 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 CASP9P55211 416 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 NNATQ16517 81 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 NTRK2Q16620 822 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 TBR1Q16650 682 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ZNF791Q3KP31 576 aaPredicted RBP11.45□□□□□ -0.58
SNX17-208ENST00000493711 RTL4Q6ZR62 310 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 PTOV1Q86YD1 416 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ZZZ3Q8IYH5 903 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 FBXW8Q8N3Y1 598 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 GOLM1Q8NBJ4 401 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 BHLHE22Q8NFJ8 381 aaPredicted RBP11.45□□□□□ -0.58
SNX17-208ENST00000493711 TMEM19Q96HH6 336 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 SMAD5Q99717 465 aaKnown RBP11.45□□□□□ -0.58
SNX17-208ENST00000493711 THTPAQ9BU02 230 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ARMC7Q9H6L4 198 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ZNF552Q9H707 407 aaPredicted RBP11.45□□□□□ -0.58
SNX17-208ENST00000493711 UBQLN4Q9NRR5 601 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 CNIH4Q9P003 139 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 SUCOQ9UBS9 1254 aaKnown RBP11.45□□□□□ -0.58
SNX17-208ENST00000493711 MAGEL2Q9UJ55 1249 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 TUBD1Q9UJT1 453 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ABCG2Q9UNQ0 655 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 ZNF232Q9UNY5 417 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 IFT52Q9Y366 437 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 KCNE3Q9Y6H6 103 aa11.45□□□□□ -0.58
SNX17-208ENST00000493711 H3BNH8 94 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 MASP2O00187 686 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 KIAA0513O60268 411 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 NME6O75414 186 aaPredicted RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 PGM3O95394 542 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 H6PDO95479 791 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 HPGDP15428 266 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 SOX3P41225 446 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 ATP12AP54707 1039 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 SNTA1Q13424 505 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 CEACAM7Q14002 265 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 ELOAQ14241 798 aaKnown RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 SYPL1Q16563 259 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 FLYWCH1Q4VC44 716 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 B3GNTL1Q67FW5 361 aaPredicted RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 FCRLBQ6BAA4 426 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 TMEM81Q6P7N7 255 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 C19orf48Q6RUI8 117 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 IGFL2Q6UWQ7 119 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 IGFL3Q6UXB1 125 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 CCDC80Q76M96 950 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 ASRGL1Q7L266 308 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 IFNEQ86WN2 208 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 PTRH1Q86Y79 214 aaKnown RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 PEX5LQ8IYB4 626 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 BEST3Q8N1M1 668 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 ZNF619Q8N2I2 560 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 ANKFN1Q8N957 763 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 OR4N2Q8NGD1 307 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 NFKBIDQ8NI38 313 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 SPPL2AQ8TCT8 520 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms