RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ZC3H10Q96K80 434 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TEFMQ96QE5 360 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CCNL2Q96S94 520 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 C19orf43Q9BQ61 176 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SCNM1Q9BWG6 230 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 MED28Q9H204 178 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ABCB9Q9NP78 766 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PARD6AQ9NPB6 346 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ATP13A2Q9NQ11 1180 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SLAMF8Q9P0V8 285 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 RHCGQ9UBD6 479 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 RPS6KA6Q9UK32 745 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PCOLCE2Q9UKZ9 415 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SAMHD1Q9Y3Z3 626 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SPTBN1Q01082 2364 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 IGF2RP11717 2491 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 DNAJC13O75165 2243 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 A0A1W2PPW3 197 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 OR2A25A4D2G3 310 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CAPN14A8MX76 684 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PLGP00747 810 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CSTAP01040 98 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TFPTP0C1Z6 253 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PABPC4LP0CB38 370 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 THRBP10828 461 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PCSK2P16519 638 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CD247P20963 164 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PEBP1P30086 187 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 HOXA6P31267 233 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CAPGP40121 348 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 KCNJ5P48544 419 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CDC42P60953 191 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 HBA1P69905 142 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 GALNT1Q10472 559 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TSC22D1Q15714 1073 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TRMT12Q53H54 448 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 RPS26P11Q5JNZ5 115 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 GARNL3Q5VVW2 1013 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 RAET1LQ5VY80 246 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 LIN54Q6MZP7 749 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 NANOGP8Q6NSW7 305 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 FAM180AQ6UWF9 173 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TMPRSS11AQ6ZMR5 421 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 VN1R5Q7Z5H4 357 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 VN1R4Q7Z5H5 301 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 KLHDC8BQ8IXV7 354 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CYP4Z2PQ8N1L4 340 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ABHD11Q8NFV4 315 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SLC22A8Q8TCC7 542 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CREB3L4Q8TEY5 395 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 UBTD2Q8WUN7 234 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 DIRAS2Q96HU8 199 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 OR2A5Q96R48 311 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 MNTQ99583 582 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF717Q9BY31 904 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CDCP1Q9H5V8 836 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 NANOGQ9H9S0 305 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PPP4R1LQ9P1A2 415 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ATPIF1Q9UII2 106 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 DKKL1Q9UK85 242 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PEX16Q9Y5Y5 336 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PCNX1Q96RV3 2341 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 DIDO1Q9BTC0 2240 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SH3PXD2BA1X283 911 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 HTR3EA5X5Y0 456 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 OR6C70A6NIJ9 312 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TTLL8A6PVC2 850 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 MASP2O00187 686 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 FOXE1O00358 373 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 RGS10O43665 173 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ZFAND5O76080 213 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 NSA2O95478 260 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 FADS2O95864 444 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 HLA-DQA2P01906 255 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 UQCRC2P22695 453 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 GSK3BP49841 420 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 HOXC5Q00444 222 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 NHLH1Q02575 133 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 HSF2Q03933 536 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 FAPQ12884 760 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SLC14A1Q13336 389 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 MADCAM1Q13477 382 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ELOAQ14241 798 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF730Q6ZMV8 503 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 C16orf47Q6ZP98 133 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ANKRD13BQ86YJ7 626 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF595Q8IYB9 648 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 DEPDC4Q8N2C3 294 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 UBE2J2Q8N2K1 259 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 MEIOBQ8N635 442 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 UCN3Q969E3 161 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 C12orf43Q96C57 262 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TMCO6Q96DC7 493 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 NXPE2Q96DL1 559 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 KAT8Q9H7Z6 458 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF225Q9UK10 706 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ABCG2Q9UNQ0 655 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 AP3M1Q9Y2T2 418 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PCDHB14Q9Y5E9 798 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CPSF4LA6NMK7 179 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms