RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RNF167Q9H6Y7 350 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 ITGB1BP2Q9UKP3 347 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 SH3D21A4FU49 640 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 ARRDC5A6NEK1 342 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 MPZL2O60487 215 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 SEMA3DO95025 777 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 RHCEP18577 417 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 CCKBRP32239 447 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 ISXQ2M1V0 245 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 SOWAHCQ53LP3 525 aaPredicted RBP21.24■□□□□ 0.99
USF3-203ENST00000491165 HES3Q5TGS1 186 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 ZNF655Q8N720 491 aaPredicted RBP21.24■□□□□ 0.99
USF3-203ENST00000491165 AQP11Q8NBQ7 271 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 OR8K5Q8NH50 307 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 CDCA4Q9BXL8 241 aa21.24■□□□□ 0.99
USF3-203ENST00000491165 CNOT2Q9NZN8 540 aaKnown RBP21.24■□□□□ 0.99
USF3-203ENST00000491165 GPC6Q9Y625 555 aaPredicted RBP21.24■□□□□ 0.99
USF3-203ENST00000491165 A0A1W2PNU3 283 aaPredicted RBP21.23■□□□□ 0.99
USF3-203ENST00000491165 OR2B3O76000 313 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 IFNW1P05000 195 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 UGT2B15P54855 530 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 STXBP1P61764 594 aaKnown RBP21.23■□□□□ 0.99
USF3-203ENST00000491165 TRA2AQ13595 282 aaKnown RBP eCLIP21.23■□□□□ 0.99
USF3-203ENST00000491165 DEFB134Q4QY38 66 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 MARCH9Q86YJ5 346 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 PARP16Q8N5Y8 322 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 RGMAQ96B86 450 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 PEX16Q9Y5Y5 336 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 TMPRSS11DO60235 418 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 PTTG1O95997 202 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 CERS1P27544 350 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 OR4C11Q6IEV9 310 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 TAGAPQ8N103 731 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 GAL3ST3Q96A11 431 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 CTRCQ99895 268 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 CLN6Q9NWW5 311 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 TAS2R16Q9NYV7 291 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 PTPRBP23467 1997 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 ZFHX4Q86UP3 3567 aa21.23■□□□□ 0.99
USF3-203ENST00000491165 FITM1A5D6W6 292 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 ZNF860A6NHJ4 632 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 ZAR1LA6NP61 321 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 EFCAB7A8K855 629 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 SLC30A4O14863 429 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 DLGAP3O95886 979 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 IL3P08700 152 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 CSTF2P33240 577 aaKnown RBP eCLIP21.22■□□□□ 0.99
USF3-203ENST00000491165 GCGRP47871 477 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 NOVA1P51513 510 aaKnown RBP21.22■□□□□ 0.99
USF3-203ENST00000491165 CRISP3P54108 245 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 DSTNP60981 165 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 PRSS53Q2L4Q9 553 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 TIMM50Q3ZCQ8 353 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 TMEM35AQ53FP2 167 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 KLHL17Q6TDP4 642 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 IKBIPQ70UQ0 350 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 SLC44A2Q8IWA5 706 aaPredicted RBP21.22■□□□□ 0.99
USF3-203ENST00000491165 FAM83FQ8NEG4 500 aaPredicted RBP21.22■□□□□ 0.99
USF3-203ENST00000491165 Q96MT0 163 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 TMEM184BQ9Y519 407 aaPredicted RBP21.22■□□□□ 0.99
USF3-203ENST00000491165 CSO75390 466 aaKnown RBP21.22■□□□□ 0.99
USF3-203ENST00000491165 MT-CO3P00414 261 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 CEACAM1P13688 526 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 CHMP24386 653 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 SOX6P35712 828 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 CRISP1P54107 249 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 BTN3A2P78410 334 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 MED22Q15528 200 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 PTCHD4Q6ZW05 846 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 AGBL5Q8NDL9 886 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 QRFPRQ96P65 431 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 NMNAT1Q9HAN9 279 aaPredicted RBP21.22■□□□□ 0.99
USF3-203ENST00000491165 MIEF1Q9NQG6 463 aa21.22■□□□□ 0.99
USF3-203ENST00000491165 DHCR7Q9UBM7 475 aaKnown RBP21.22■□□□□ 0.99
USF3-203ENST00000491165 A0A0A6YYD5 115 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 HYKKA2RU49 373 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 FOXS1O43638 330 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 GASTP01350 101 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 ALOX12P18054 663 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 FUT4P22083 530 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 UQCRC2P22695 453 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 ATP5A1P25705 553 aaKnown RBP21.21■□□□□ 0.99
USF3-203ENST00000491165 SSR2P43308 183 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 TPTEP56180 551 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 TCTE1Q5JU00 501 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 MANEAQ5SRI9 462 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 MMP21Q8N119 569 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 METTL27Q8N6F8 245 aaPredicted RBP21.21■□□□□ 0.99
USF3-203ENST00000491165 ACOT4Q8N9L9 421 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 TXNDC15Q96J42 360 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 OR5M11Q96RB7 305 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 MGLLQ99685 303 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 NLNQ9BYT8 704 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 ROGDIQ9GZN7 287 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 DDX31Q9H8H2 851 aaKnown RBP21.21■□□□□ 0.99
USF3-203ENST00000491165 TMEM165Q9HC07 324 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 ENAMQ9NRM1 1142 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 RHCGQ9UBD6 479 aa21.21■□□□□ 0.99
USF3-203ENST00000491165 HIST1H1TP22492 207 aaPredicted RBP21.2■□□□□ 0.98
USF3-203ENST00000491165 GTF2E2P29084 291 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms