RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 CITO14578 2027 aa4.2□□□□□ -1.74
SSX2IP-208ENST00000490476 SF3B1O75533 1304 aaKnown RBP eCLIP4.2□□□□□ -1.74
SSX2IP-208ENST00000490476 A0A087WZ39 114 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 TRBV2A0A0J9YWF9 115 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 MACROD2A1Z1Q3 448 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 MSGN1A6NI15 193 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 BLOC1S5-TXNDC5H3BN57 136 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 K7EQS6 105 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SLC28A1O00337 649 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 PRRG1O14668 218 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SYT7O43581 403 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 DFNA5O60443 496 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 LY6G6DO95868 133 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 VTNP04004 478 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 GSTA2P09210 222 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 HSPD1P10809 573 aaKnown RBP4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 ODC1P11926 461 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 ZNF18P17022 549 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 AADACP22760 399 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SFNP31947 248 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 OR1D2P34982 312 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SOX3P41225 446 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 RABIFP47224 123 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 OR3A2P47893 321 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 PITPNBP48739 271 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 ART3Q13508 389 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 CCDC40Q4G0X9 1142 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 PRR30Q53SZ7 412 aaPredicted RBP4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 VWA2Q5GFL6 755 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 PRAMEF7Q5VXH5 474 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 TWF2Q6IBS0 349 aaKnown RBP4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 FAM53AQ6NSI3 398 aaPredicted RBP4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 LEKR1Q6ZMV7 388 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 WDR88Q6ZMY6 472 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 ADAMTSL2Q86TH1 951 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 HOGA1Q86XE5 327 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 ZNF444Q8N0Y2 327 aaPredicted RBP4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 CCDC185Q8N715 623 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 TMEM99Q8N816 258 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 TMEM185AQ8NFB2 350 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 WDR36Q8NI36 951 aaKnown RBP4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 KIAA1524Q8TCG1 905 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 UBTD2Q8WUN7 234 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SMPDL3AQ92484 453 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SLC35C1Q96A29 364 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 RBMXL1Q96E39 390 aaKnown RBP4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 CXorf58Q96LI9 332 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 IL12RB2Q99665 862 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 PKP2Q99959 881 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 WWTR1Q9GZV5 400 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 CARD9Q9H257 536 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SDF2L1Q9HCN8 221 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 KCNMB3Q9NPA1 279 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 WDR37Q9Y2I8 494 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 ANGPTL3Q9Y5C1 460 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 SELENOKQ9Y6D0 94 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 UNC13CQ8NB66 2214 aa4.19□□□□□ -1.74
SSX2IP-208ENST00000490476 PLIN4Q96Q06 1357 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 K7EM74 188 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 SLC1A7O00341 560 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 PCDH7O60245 1069 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 MAGEC1O60732 1142 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 MT-ATP6P00846 226 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 KRT3P12035 628 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 ETS1P14921 441 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 STIP1P31948 543 aaKnown RBP4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 TIMP3P35625 211 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 TNFSF10P50591 281 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 CNN1P51911 297 aaKnown RBP4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 PAX9P55771 341 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 CNTN1Q12860 1018 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 SPHARQ15513 63 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 TOR1AIP1Q5JTV8 583 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 ATP1A1-AS1Q5TC04 95 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 ZNF776Q68DI1 518 aaPredicted RBP4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 OR6B2Q6IFH4 312 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 RFPL4BQ6ZWI9 263 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 C1orf186Q6ZWK4 172 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 DCUN1D3Q8IWE4 304 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 SLC43A2Q8N370 569 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 TEX26Q8N6G2 289 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 ANKRD20A12PQ8NF67 263 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 MAGED4Q96JG8 741 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 FAM111AQ96PZ2 611 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 GPR174Q9BXC1 333 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 PITPNM3Q9BZ71 974 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 ZNF665Q9H7R5 613 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 PIGVQ9NUD9 493 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 ARMCX1Q9P291 453 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 SPASTQ9UBP0 616 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 PILRAQ9UKJ1 303 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 TSPAN16Q9UKR8 245 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 ERVK-19Q9WJR5 959 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 PIN4Q9Y237 131 aaKnown RBP4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 SLCO1B1Q9Y6L6 691 aa4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 MDC1Q14676 2089 aaKnown RBP4.18□□□□□ -1.74
SSX2IP-208ENST00000490476 A0A1W2PR80 420 aa4.17□□□□□ -1.74
SSX2IP-208ENST00000490476 CFAP73A6NFT4 308 aa4.17□□□□□ -1.74
SSX2IP-208ENST00000490476 ARHGAP42A6NI28 874 aa4.17□□□□□ -1.74
SSX2IP-208ENST00000490476 IFITM10A6NMD0 228 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms