RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 C8orf4Q9NR00 106 aa20.03■□□□□ 0.8
SMC4-221ENST00000489573 NPIPA5A0A0B4J1W7 369 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 CENPVL1A0A0U1RR11 272 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 NPIPA7E9PJI5 369 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 ACOX3O15254 700 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 DNAJB5O75953 348 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 IGHEP01854 428 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 NPIPA8P0DM63 369 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 IL7RP16871 459 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 ZNF26P17031 533 aaPredicted RBP20.02■□□□□ 0.8
SMC4-221ENST00000489573 TCN2P20062 427 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 IST1P53990 364 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 SLC26A5P58743 744 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 DECR1Q16698 335 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.02■□□□□ 0.84e-9■■■■■ 118.1
SMC4-221ENST00000489573 ZNF836Q6ZNA1 936 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 CBR4Q8N4T8 237 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 PACRGLQ8N7B6 248 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 OR5K1Q8NHB7 308 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 DNAJC9Q8WXX5 260 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 ARHGDIGQ99819 225 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 REEP1Q9H902 201 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 VNN3Q9NY84 501 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 ZNF223Q9UK11 482 aaPredicted RBP20.02■□□□□ 0.8
SMC4-221ENST00000489573 FAM32AQ9Y421 112 aaKnown RBP20.02■□□□□ 0.8
SMC4-221ENST00000489573 PCDHGA10Q9Y5H3 936 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 AK5Q9Y6K8 562 aa20.02■□□□□ 0.8
SMC4-221ENST00000489573 M0R3H8 397 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 PDLIM1O00151 329 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 PEX12O00623 359 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 SOCS2O14508 198 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 ADAMDEC1O15204 470 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 AQP4P55087 323 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 MAPK14Q16539 360 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 NRF1Q16656 503 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 EIPR1Q53HC9 387 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 PPP4R4Q6NUP7 873 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 ZDHHC13Q8IUH4 622 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 LACC1Q8IV20 430 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 GALNT4Q8N4A0 578 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 C17orf47Q8NEP4 570 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 OR4D11Q8NGI4 311 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 SDCCAG3Q96C92 435 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 SLC29A1Q99808 456 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 KLHL28Q9NXS3 571 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 KCNE5Q9UJ90 142 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 C15orf41Q9Y2V0 281 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 SAMHD1Q9Y3Z3 626 aaKnown RBP20.01■□□□□ 0.79
SMC4-221ENST00000489573 CCDC88CQ9P219 2028 aa20.01■□□□□ 0.79
SMC4-221ENST00000489573 SLC30A4O14863 429 aa20■□□□□ 0.79
SMC4-221ENST00000489573 TO15178 435 aa20■□□□□ 0.79
SMC4-221ENST00000489573 PRKNO60260 465 aaPredicted RBP20■□□□□ 0.79
SMC4-221ENST00000489573 UGT2B17O75795 530 aa20■□□□□ 0.79
SMC4-221ENST00000489573 RASAL1O95294 804 aa20■□□□□ 0.79
SMC4-221ENST00000489573 NID1P14543 1247 aa20■□□□□ 0.79
SMC4-221ENST00000489573 RHCEP18577 417 aa20■□□□□ 0.79
SMC4-221ENST00000489573 RRM2P31350 389 aa20■□□□□ 0.79
SMC4-221ENST00000489573 DCTP40126 519 aa20■□□□□ 0.79
SMC4-221ENST00000489573 YAP1P46937 504 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 PSMD4P55036 377 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 EEF1A1P68104 462 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 RNF4P78317 190 aa20■□□□□ 0.79
SMC4-221ENST00000489573 PCOLCEQ15113 449 aa20■□□□□ 0.79
SMC4-221ENST00000489573 HSDL2Q6YN16 418 aa20■□□□□ 0.79
SMC4-221ENST00000489573 DEF8Q6ZN54 512 aa20■□□□□ 0.79
SMC4-221ENST00000489573 NLGN4XQ8N0W4 816 aa20■□□□□ 0.79
SMC4-221ENST00000489573 ZNF441Q8N8Z8 693 aa20■□□□□ 0.79
SMC4-221ENST00000489573 NLGN4YQ8NFZ3 816 aaPredicted RBP20■□□□□ 0.79
SMC4-221ENST00000489573 LMF1Q96S06 567 aa20■□□□□ 0.79
SMC4-221ENST00000489573 PIP5K1AQ99755 562 aa20■□□□□ 0.79
SMC4-221ENST00000489573 WFDC6Q9BQY6 131 aa20■□□□□ 0.79
SMC4-221ENST00000489573 POLR1BQ9H9Y6 1135 aa20■□□□□ 0.79
SMC4-221ENST00000489573 MRTO4Q9UKD2 239 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 CHST2Q9Y4C5 530 aa20■□□□□ 0.79
SMC4-221ENST00000489573 TESMINQ9Y4I5 508 aa20■□□□□ 0.79
SMC4-221ENST00000489573 HS3ST3B1Q9Y662 390 aa20■□□□□ 0.79
SMC4-221ENST00000489573 U3KQV3 271 aa20■□□□□ 0.79
SMC4-221ENST00000489573 G3V2T6 193 aa20■□□□□ 0.79
SMC4-221ENST00000489573 J3KTA2 159 aa20■□□□□ 0.79
SMC4-221ENST00000489573 IL33O95760 270 aa20■□□□□ 0.79
SMC4-221ENST00000489573 FPR1P21462 350 aa20■□□□□ 0.79
SMC4-221ENST00000489573 MMP11P24347 488 aa20■□□□□ 0.79
SMC4-221ENST00000489573 DNAJA1P31689 397 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 NR0B1P51843 470 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 PSPHP78330 225 aa20■□□□□ 0.79
SMC4-221ENST00000489573 GABREP78334 506 aa20■□□□□ 0.79
SMC4-221ENST00000489573 SPIBQ01892 262 aa20■□□□□ 0.79
SMC4-221ENST00000489573 PPP1R8Q12972 351 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 RNF220Q5VTB9 566 aa20■□□□□ 0.79
SMC4-221ENST00000489573 TMEM179BQ7Z7N9 219 aa20■□□□□ 0.79
SMC4-221ENST00000489573 ZNF605Q86T29 641 aa20■□□□□ 0.79
SMC4-221ENST00000489573 CYP4Z1Q86W10 505 aa20■□□□□ 0.79
SMC4-221ENST00000489573 HIPK1Q86Z02 1210 aa20■□□□□ 0.79
SMC4-221ENST00000489573 RBM45Q8IUH3 476 aaKnown RBP20■□□□□ 0.79
SMC4-221ENST00000489573 CLIP4Q8N3C7 705 aa20■□□□□ 0.79
SMC4-221ENST00000489573 HSPBAP1Q96EW2 488 aa20■□□□□ 0.79
SMC4-221ENST00000489573 NRSN2Q9GZP1 204 aa20■□□□□ 0.79
SMC4-221ENST00000489573 ZNF700Q9H0M5 742 aa20■□□□□ 0.79
SMC4-221ENST00000489573 TCFL5Q9UL49 500 aa20■□□□□ 0.79
SMC4-221ENST00000489573 FARSAQ9Y285 508 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms