RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 FASLGP48023 281 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 NTHL1P78549 312 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 GBX1Q14549 363 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 NOXA1Q86UR1 476 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 OR5H2Q8NGV7 314 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 PELI2Q9HAT8 420 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 LATS1O95835 1130 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 S100PP25815 95 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 RORAP35398 523 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 INHBCP55103 352 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 GRIN2CQ14957 1233 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 PPA1Q15181 289 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 RSU1Q15404 277 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 SHDQ96IW2 340 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 STARD5Q9NSY2 213 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 C2orf42Q9NWW7 574 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 DCDC2BA2VCK2 349 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 VSTM2BA6NLU5 285 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 J3KTA2 159 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 CDK1P06493 297 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 MAMDC2Q7Z304 686 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 GTPBP8Q8N3Z3 284 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 LOC105369274A0A096LPK9 316 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 LOC102723532A0A0G2JNH3 316 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 M0QZQ0 153 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 ALDOCP09972 364 aaKnown RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 EIF2B1Q14232 305 aaKnown RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 SMN1Q16637 294 aaKnown RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 PRR22Q8IZ63 422 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 OR4N4Q8N0Y3 316 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 THAP7Q9BT49 309 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 ZDHHC7Q9NXF8 308 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 IER3IP1Q9Y5U9 82 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 OR52A4PA6NMU1 304 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 SLC22A5O76082 557 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 JMJD7P0C870 316 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 NSDHLQ15738 373 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 HSD11B1LQ7Z5J1 315 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 SLA2Q9H6Q3 261 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 DDX31Q9H8H2 851 aaKnown RBP16.64■□□□□ 0.25
NPHP4-209ENST00000489180 PCDHA9Q9Y5H5 950 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 MYH7BA7E2Y1 1941 aa16.64■□□□□ 0.25
NPHP4-209ENST00000489180 LOC285095A0A1B0GVY8 99 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 PHYHO14832 338 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 ARPC1BO15143 372 aaKnown RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 SC5DO75845 299 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 GYPBP06028 91 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 DDCP20711 480 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF140P52738 457 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 ACTBP60709 375 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 ACTG1P63261 375 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 PXKQ7Z7A4 578 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 SERPINA11Q86U17 422 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF440Q8IYI8 595 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 MS4A4EQ96PG1 132 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 SLC17A9Q9BYT1 436 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 PRDM9Q9NQV7 894 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 RNF215Q9Y6U7 377 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 SDC3O75056 442 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 EIF4HQ15056 248 aaKnown RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 POU4F3Q15319 338 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 ARHGAP12Q8IWW6 846 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 GMPR2Q9P2T1 348 aaKnown RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 LSM5Q9Y4Y9 91 aaKnown RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 BACE2Q9Y5Z0 518 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 F5H5P2 479 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 RPL35P42766 123 aaKnown RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 VEZF1Q14119 521 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF691Q5VV52 312 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 KCTD20Q7Z5Y7 419 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 CDC6Q99741 560 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 OR5K4A6NMS3 321 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 OR8U9P0C7N5 309 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 HHEXQ03014 270 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 DLX2Q07687 328 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 Q6ZPB1 254 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 TMEM150AQ86TG1 271 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 NLGN4YQ8NFZ3 816 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-209ENST00000489180 DCUN1D4Q92564 292 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 EGLN2Q96KS0 407 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 TAS2R8Q9NYW2 309 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 NUP188Q5SRE5 1749 aa16.63■□□□□ 0.25
NPHP4-209ENST00000489180 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 A6NLC8 198 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 TNFSF12O43508 249 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 SYT7O43581 403 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 NDUFB2O95178 105 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 DIRAS3O95661 229 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 FXYD4P59646 89 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 CSNK2A1P68400 391 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-209ENST00000489180 GRM7Q14831 915 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 RAB30Q15771 203 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 EEF1A1P5Q5VTE0 462 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 CSNK2A3Q8NEV1 391 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 CDS1Q92903 461 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 MT-ND4P03905 459 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 TMEM225BP0DP42 221 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms