RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PRDX6P30041 224 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 ADSSP30520 456 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 MDH1P40925 334 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 SLC6A8P48029 635 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 EFNA3P52797 238 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 RIPPLY3P57055 190 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 RIPK4P57078 832 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 NLRP11P59045 1033 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 EIF4EBP2Q13542 120 aaPredicted RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 BTG3Q14201 252 aaPredicted RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 CLPPQ16740 277 aaPredicted RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 CWC27Q6UX04 472 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 TMEM26Q6ZUK4 368 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 BNIPLQ7Z465 357 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 YRDCQ86U90 279 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 VPS36Q86VN1 386 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 MISPQ8IVT2 679 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 CERS5Q8N5B7 392 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 BCORP1Q8N888 145 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 MINDY2Q8NBR6 621 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 SELENOMQ8WWX9 145 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 PHYHIPQ92561 330 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 LHX4Q969G2 390 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 NCLNQ969V3 563 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 PINX1Q96BK5 328 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 GPA33Q99795 319 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 FICDQ9BVA6 458 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 HCAR1Q9BXC0 346 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 COQ10BQ9H8M1 238 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 ZNF702PQ9H963 129 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 ROPN1Q9HAT0 212 aaPredicted RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 STARD5Q9NSY2 213 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.43□□□□□ -2.02
RFC4-213ENST00000489028 APOBEC3BQ9UH17 382 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 IL20RAQ9UHF4 553 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 MGAT4BQ9UQ53 548 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 PTPRUQ92729 1446 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TMEM89A2RUT3 159 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 LGALS8O00214 317 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 EI24O14681 340 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 LATO43561 262 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 LCMT2O60294 686 aaKnown RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 ZNF861PO60384 105 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TOM1L1O75674 476 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 HOXB7P09629 217 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TSPY4P0CV99 314 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TSPY10P0CW01 314 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 CALCBP10092 127 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 RRASP10301 218 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TNNI3P19429 210 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 FUT1P19526 365 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 IGHV1-2P23083 117 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TMOD1P28289 359 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 RAG2P55895 527 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 HSF2Q03933 536 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 ANKDD1AQ495B1 522 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 SBK1Q52WX2 424 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 AGKQ53H12 422 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 LDLRAP1Q5SW96 308 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 WSCD1Q658N2 575 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TGIF2LYQ8IUE0 185 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 PYROXD2Q8N2H3 581 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 ZNF540Q8NDQ6 660 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 DENND6BQ8NEG7 585 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 OR2L5Q8NG80 312 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 OR52B4Q8NGK2 314 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TFB1MQ8WVM0 346 aaKnown RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 THRSPQ92748 146 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TMEM45BQ96B21 275 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 C11orf24Q96F05 449 aaPredicted RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 WRAP53Q9BUR4 548 aaKnown RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 APOOQ9BUR5 198 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 C19orf24Q9BVV8 132 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TPPP3Q9BW30 176 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 CARD6Q9BX69 1037 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 NLNQ9BYT8 704 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 CCSER1Q9C0I3 900 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 FAM124BQ9H5Z6 455 aaPredicted RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 FARSBQ9NSD9 589 aaKnown RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 AATFQ9NY61 560 aaKnown RBP eCLIP2.42□□□□□ -2.02
RFC4-213ENST00000489028 CGNQ9P2M7 1197 aaKnown RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 ZNF490Q9ULM2 529 aaPredicted RBP2.42□□□□□ -2.02
RFC4-213ENST00000489028 CHMP2BQ9UQN3 213 aa2.42□□□□□ -2.02
RFC4-213ENST00000489028 LRRK1Q38SD2 2015 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 NPIPA5A0A0B4J1W7 369 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 A0A1B0GWJ7 208 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ANKRD30BLA7E2S9 258 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 NPIPA5E9PKD4 350 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 PDLIM1O00151 329 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 BUB1O43683 1085 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 VPS26AO75436 327 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 MFN2O95140 757 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ECDO95905 644 aaPredicted RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 GSTA1P08263 222 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 HSPA5P11021 654 aaKnown RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 CYP2F1P24903 491 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 PRDX2P32119 198 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 TRPC1P48995 793 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms