RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 DECR1Q16698 335 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 GLE1Q53GS7 698 aaKnown RBP16.6■□□□□ 0.25
HDAC6-231ENST00000488905 FAM71E1Q6IPT2 247 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 Q71RC1 249 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-231ENST00000488905 OR2L13Q8N349 312 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 FNDC9Q8TBE3 224 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 C1GALT1C1Q96EU7 318 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 PIK3IP1Q96FE7 263 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF845Q96IR2 970 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-231ENST00000488905 PIP5K1AQ99755 562 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 RTN4RQ9BZR6 473 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 GLIPR2Q9H4G4 154 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 PTGES2Q9H7Z7 377 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 RNF122Q9H9V4 155 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 Q9N2J8 555 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 MID1IP1Q9NPA3 183 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 MYNNQ9NPC7 610 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 SDHAF3Q9NRP4 125 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 GRID1Q9ULK0 1009 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF337Q9Y3M9 751 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF175Q9Y473 711 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 GOLGA8RI6L899 631 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 LINC01387J3KSC0 135 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 UPK1AO00322 258 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 ARHGEF9O43307 516 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 EMC8O43402 210 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 TNFRSF21O75509 655 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 GSTA1P08263 222 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 UGT2B10P36537 528 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 FGFBP1Q14512 234 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 PON3Q15166 354 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 ZNHIT3Q15649 155 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-231ENST00000488905 IMPG1Q17R60 797 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 CLEC9AQ6UXN8 241 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 P3H2Q8IVL5 708 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 LRRC75A-AS1Q8N1F1 130 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.59■□□□□ 0.25
HDAC6-231ENST00000488905 ACMSDQ8TDX5 336 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 PIGTQ969N2 578 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 PIGQQ9BRB3 760 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 SLC39A3Q9BRY0 314 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF395Q9H8N7 513 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-231ENST00000488905 ELOVL5Q9NYP7 299 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 TAS2R7Q9NYW3 318 aa16.59■□□□□ 0.25
HDAC6-231ENST00000488905 POLR3HQ9Y535 204 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-231ENST00000488905 PRR14LQ5THK1 2151 aa16.58■□□□□ 0.25
HDAC6-231ENST00000488905 UBFD1O14562 309 aaKnown RBP16.58■□□□□ 0.24
HDAC6-231ENST00000488905 RIPK2O43353 540 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 SMPD2O60906 423 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 IL33O95760 270 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 CGAP01215 116 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 HEXAP06865 529 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 CD8BP10966 210 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 KCNJ5P48544 419 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 CLK3P49761 638 aaKnown RBP16.58■□□□□ 0.24
HDAC6-231ENST00000488905 PSMD4P55036 377 aaKnown RBP16.58■□□□□ 0.24
HDAC6-231ENST00000488905 CLDN20P56880 219 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 GUSBP1Q15486 140 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 METTL25Q8N6Q8 603 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 COX4I2Q96KJ9 171 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 AMDHD1Q96NU7 426 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 LMF2Q9BU23 707 aaKnown RBP16.58■□□□□ 0.24
HDAC6-231ENST00000488905 UBTD1Q9HAC8 227 aa16.58■□□□□ 0.24
HDAC6-231ENST00000488905 PSMC3IPQ9P2W1 217 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-231ENST00000488905 MRTO4Q9UKD2 239 aaKnown RBP16.58■□□□□ 0.24
HDAC6-231ENST00000488905 C16orf97H3BN30 126 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 FCGR2AP12318 317 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 RFX3P48380 749 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 RPS3AP61247 264 aaKnown RBP16.57■□□□□ 0.24
HDAC6-231ENST00000488905 OCRLQ01968 901 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 IKBIPQ70UQ0 350 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 TRMT10CQ7L0Y3 403 aaKnown RBP16.57■□□□□ 0.24
HDAC6-231ENST00000488905 ZNF550Q7Z398 422 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 MARCH3Q86UD3 253 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 CCNYL1Q8N7R7 359 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 FAM76AQ8TAV0 307 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 GFM2Q969S9 779 aaKnown RBP16.57■□□□□ 0.24
HDAC6-231ENST00000488905 ELP4Q96EB1 424 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 MARK4Q96L34 752 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 CCL19Q99731 98 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 TBL1XR1Q9BZK7 514 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 EMCNQ9ULC0 261 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 AP4B1Q9Y6B7 739 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 CSPG4Q6UVK1 2322 aa16.57■□□□□ 0.24
HDAC6-231ENST00000488905 IGLV3-32A0A0A0MS00 114 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 FAM171A2A8MVW0 826 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 RSL1D1O76021 490 aaKnown RBP16.56■□□□□ 0.24
HDAC6-231ENST00000488905 UTS2O95399 124 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 IFI6P09912 130 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 PYGBP11216 843 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 FPR1P21462 350 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 ACKR1Q16570 336 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 GLYR1Q49A26 553 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-231ENST00000488905 FRMD7Q6ZUT3 714 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 TRIM46Q7Z4K8 759 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 DUSP19Q8WTR2 217 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 MZB1Q8WU39 189 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 CAVIN3Q969G5 261 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms