RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 FREM3P0C091 2139 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 TTC36A6NLP5 189 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 EMC8O43402 210 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 ACP2P11117 423 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 LAMP1P11279 417 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 BGNP21810 368 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 BMP5P22003 454 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 DPP4P27487 766 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 SRYQ05066 204 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 RCAN2Q14206 197 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 ENPP6Q6UWR7 440 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 FADS6Q8N9I5 356 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 RELL2Q8NC24 303 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-215ENST00000488494 CEP70Q8NHQ1 597 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 JADE3Q92613 823 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 HOXB13Q92826 284 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-215ENST00000488494 FAM120BQ96EK7 910 aaKnown RBP16.11■□□□□ 0.17
ITGB1-215ENST00000488494 C20orf27Q9GZN8 174 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 SIRT3Q9NTG7 399 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-215ENST00000488494 ZCCHC3Q9NUD5 404 aaKnown RBP16.11■□□□□ 0.17
ITGB1-215ENST00000488494 SNX8Q9Y5X2 465 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 ARHGAP21Q5T5U3 1957 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 HCFC1P51610 2035 aa16.11■□□□□ 0.17
ITGB1-215ENST00000488494 KIAA1549Q9HCM3 1950 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 A0A1W2PRB8 838 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 NKX2-2O95096 273 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 CEACAM8P31997 349 aaPredicted RBP16.1■□□□□ 0.17
ITGB1-215ENST00000488494 TIMP3P35625 211 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 MAP3K8P41279 467 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 PRR5P85299 388 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 SF3B4Q15427 424 aaKnown RBP eCLIP16.1■□□□□ 0.173e-10■□□□□ 10.3
ITGB1-215ENST00000488494 DUSP5Q16690 384 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 GRAMD1BQ3KR37 738 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 CPTPQ5TA50 214 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 AAGABQ6PD74 315 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 CROCCP2Q86T23 111 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 MARCH3Q86UD3 253 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 TRIM42Q8IWZ5 723 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 ANKRD42Q8N9B4 389 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 SLC16A11Q8NCK7 471 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 OR2M3Q8NG83 312 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 NUDT8Q8WV74 236 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 C14orf79Q96F83 325 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 LURAP1Q96LR2 239 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 SORT1Q99523 831 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 TUBA1CQ9BQE3 449 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 YIPF4Q9BSR8 244 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 TBL1XR1Q9BZK7 514 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 DSN1Q9H410 356 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 ATAD3AQ9NVI7 634 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 EIF3LQ9Y262 564 aaKnown RBP16.1■□□□□ 0.17
ITGB1-215ENST00000488494 RAP2CQ9Y3L5 183 aa16.1■□□□□ 0.17
ITGB1-215ENST00000488494 POLQO75417 2590 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 MBD3L4A6NDZ8 208 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 MBD3L3A6NE82 208 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 MBD3L5A6NJ08 208 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 CD8B2A6NJW9 211 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 DVL2O14641 736 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 C6orf47O95873 294 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 IL2RAP01589 272 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 G6PDP11413 515 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 CPN1P15169 458 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 PRPS1L1P21108 318 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 SLC1A6P48664 564 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 STARP49675 285 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 CLK3P49761 638 aaKnown RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 LHX2P50458 406 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 ZNF136P52737 540 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 DSCR4P56555 118 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 TLE4Q04727 773 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 MAD2L1Q13257 205 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 MLC1Q15049 377 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 RAET1LQ5VY80 246 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 DMRTC2Q8IXT2 367 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 COX18Q8N8Q8 333 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 MBD3L2Q8NHZ7 208 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 C16orf58Q96GQ5 468 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 PAIP2Q9BPZ3 127 aaKnown RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 SDHAF3Q9NRP4 125 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 NOP53Q9NZM5 478 aaKnown RBP16.09■□□□□ 0.17
ITGB1-215ENST00000488494 MED11Q9P086 117 aa16.09■□□□□ 0.17
ITGB1-215ENST00000488494 GMFGO60234 142 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 ZIC3O60481 467 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 ALOX5P09917 674 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 PRIM2P49643 509 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 CLDN18P56856 261 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 B3GALT5-AS1P59052 145 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 EMX2Q04743 252 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 GANABQ14697 944 aaKnown RBP16.08■□□□□ 0.16
ITGB1-215ENST00000488494 LASP1Q14847 261 aaKnown RBP16.08■□□□□ 0.16
ITGB1-215ENST00000488494 SPDYE7PQ495Y7 208 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 FIGNL1Q6PIW4 674 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 PLXDC2Q6UX71 529 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 ZAR1Q86SH2 424 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 LURAP1LQ8IV03 231 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 RIMKLAQ8IXN7 391 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 C9orf106Q8NAJ2 232 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 ZPLD1Q8TCW7 415 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 OR5P2Q8WZ92 322 aa16.08■□□□□ 0.16
ITGB1-215ENST00000488494 CHMP6Q96FZ7 201 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms