RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	BTK	Q06187	659 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	CKAP4	Q07065	602 aa	Known RBP	13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	C2orf80	Q0P641	193 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	ZNF155	Q12901	538 aa	Predicted RBP	13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	STX5	Q13190	355 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	DECR1	Q16698	335 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	ANKRD34A	Q69YU3	496 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	C22orf34	Q6ZV56	151 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	FAM214B	Q7L5A3	538 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	CAVIN3	Q969G5	261 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	C11orf24	Q96F05	449 aa	Predicted RBP	13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	KLHL4	Q9C0H6	718 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	FAM120C	Q9NX05	1096 aa	Known RBP	13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	FLRT3	Q9NZU0	649 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	MRTO4	Q9UKD2	239 aa	Known RBP	13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	GRID1	Q9ULK0	1009 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	STK38L	Q9Y2H1	464 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	AP4B1	Q9Y6B7	739 aa		13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	FN1	P02751	2386 aa	Known RBP	13.65	□□□□□ -0.22
NELFA-215	ENST00000488452	SERTM1	A2A2V5	107 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	CCDC151	A5D8V7	595 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	TRIM64	A6NGJ6	449 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	TRIM64B	A6NI03	449 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	DLX3	O60479	287 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	IL33	O95760	270 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	JUN	P05412	331 aa	Known RBP	13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	DDC	P20711	480 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	NCBP2	P52298	156 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	GUSBP1	Q15486	140 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	SGCB	Q16585	318 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	PRSS53	Q2L4Q9	553 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	LGSN	Q5TDP6	509 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	PLEKHM3	Q6ZWE6	761 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	MARCH3	Q86UD3	253 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	METTL25	Q8N6Q8	603 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	GFM2	Q969S9	779 aa	Known RBP	13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	C1GALT1C1	Q96EU7	318 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	TMEM237	Q96Q45	408 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	EBPL	Q9BY08	206 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	GSX2	Q9BZM3	304 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	RTN4R	Q9BZR6	473 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452		Q9N2J8	555 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	PLSCR4	Q9NRQ2	329 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	TAS2R7	Q9NYW3	318 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	TMEM216	Q9P0N5	145 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	ARID1A	O14497	2285 aa		13.64	□□□□□ -0.23
NELFA-215	ENST00000488452	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	AQP8	O94778	261 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	ENO1	P06733	434 aa	Known RBP	13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	FCGR2A	P12318	317 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	PPP3CB	P16298	524 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	ATP5F1	P24539	256 aa	Predicted RBP	13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	PTH2R	P49190	550 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	PRKAA2	P54646	552 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	PSMD4	P55036	377 aa	Known RBP	13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	PKNOX1	P55347	436 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	C17orf67	Q0P5P2	114 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	ZNHIT3	Q15649	155 aa	Predicted RBP	13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	EXOC3L2	Q2M3D2	409 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	SPDYA	Q5MJ70	313 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	TMEM107	Q6UX40	140 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	TIFAB	Q6ZNK6	161 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	IFT81	Q8WYA0	676 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	MDFI	Q99750	246 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	PRRG4	Q9BZD6	226 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	STOML1	Q9UBI4	398 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452	TIMM22	Q9Y584	194 aa		13.63	□□□□□ -0.23
NELFA-215	ENST00000488452		A0A087WUV0	522 aa	Predicted RBP	13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	IGLV3-32	A0A0A0MS00	114 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	UPK1A	O00322	258 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	KLF4	O43474	513 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	PSMG1	O95456	288 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	CNOT4	O95628	575 aa	Known RBP	13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	THBD	P07204	575 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	PAX1	P15863	534 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	PPP2R2B	Q00005	443 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	ZNF763	Q0D2J5	394 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	LCP2	Q13094	533 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	TMEM44	Q2T9K0	475 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	BEX5	Q5H9J7	111 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	FAM71E1	Q6IPT2	247 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	SH2D5	Q6ZV89	423 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	LCA5	Q86VQ0	697 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	SLC22A9	Q8IVM8	553 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	OR2L13	Q8N349	312 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	CDC26	Q8NHZ8	85 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	ELP4	Q96EB1	424 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	L3HYPDH	Q96EM0	354 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	KCNA7	Q96RP8	456 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	FMO2	Q99518	471 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	LMF2	Q9BU23	707 aa	Known RBP	13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	TBL1XR1	Q9BZK7	514 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	GLIPR2	Q9H4G4	154 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	C3orf14	Q9HBI5	128 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	MIEF1	Q9NQG6	463 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	DDX18	Q9NVP1	670 aa	Known RBP	13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	WBP11	Q9Y2W2	641 aa	Known RBP	13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	EMC9	Q9Y3B6	208 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms