RNA–Protein interactions for RNA: ENST00000488338.2

LAMTOR4-210, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, human

TSL 3

Gene LAMTOR4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMTOR4-210	ENST00000488338	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	REP15	Q6BDI9	236 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	HEPHL1	Q6MZM0	1159 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	DLEU7	Q6UYE1	221 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	RETREG3	Q86VR2	466 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	SLC22A16	Q86VW1	577 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ZFP62	Q8NB50	900 aa	Predicted RBP	13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	CPT1C	Q8TCG5	803 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	PMM1	Q92871	262 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	SNRNP40	Q96DI7	357 aa	Known RBP	13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ZNF597	Q96LX8	424 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	NODAL	Q96S42	347 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	SDF2	Q99470	211 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	CGREF1	Q99674	301 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TBL1XR1	Q9BZK7	514 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	UBQLN4	Q9NRR5	601 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	SLC25A37	Q9NYZ2	338 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	CALML5	Q9NZT1	146 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	VAPA	Q9P0L0	249 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	SLAMF8	Q9P0V8	285 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	P2RX2	Q9UBL9	471 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	B4GALT7	Q9UBV7	327 aa		13.55	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TRBV5-3	A0A0A0MS03	114 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	FBP2	O00757	339 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	SCD	O00767	359 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ICOSLG	O75144	302 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	UNC5C	O95185	931 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	IGKV1D-16	P01601	117 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	NGFR	P08138	427 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	CD1E	P15812	388 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ZNF24	P17028	368 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TBXA2R	P21731	343 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ELAVL4	P26378	380 aa	Known RBP	13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	EVI2B	P34910	448 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	DNASE1L1	P49184	302 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ALDH6A1	Q02252	535 aa	Known RBP	13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	GPAT3	Q53EU6	434 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	RUNDC3A	Q59EK9	446 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	COLEC12	Q5KU26	742 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	CCNJ	Q5T5M9	372 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	PRICKLE2	Q7Z3G6	844 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	GRHL3	Q8TE85	626 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	FAR1	Q8WVX9	515 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	OIT3	Q8WWZ8	545 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	RAB8B	Q92930	207 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ROPN1L	Q96C74	230 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	LRRC58	Q96CX6	371 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	AURKB	Q96GD4	344 aa	Predicted RBP	13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TMEM41A	Q96HV5	264 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	FRMD6	Q96NE9	622 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ANKRD27	Q96NW4	1050 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TRNT1	Q96Q11	434 aa	Known RBP	13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	THUMPD3	Q9BV44	507 aa	Known RBP	13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	EFCAB1	Q9HAE3	211 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	IL1RL2	Q9HB29	575 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ZFP64	Q9NPA5	681 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	DEPP	Q9NTK1	212 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	OLAH	Q9NV23	265 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	RALY	Q9UKM9	306 aa	Known RBP	13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	KCNE3	Q9Y6H6	103 aa		13.54	□□□□□ -0.24
LAMTOR4-210	ENST00000488338		G3V3Y1	287 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338		H3BNH8	94 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TFEC	O14948	347 aa	Predicted RBP	13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	FADS1	O60427	444 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TRIM3	O75382	744 aa	Predicted RBP	13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	NR2F1	P10589	423 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ETFA	P13804	333 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ENDOU	P21128	410 aa	Known RBP	13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	MVD	P53602	400 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ATP12A	P54707	1039 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	ART3	Q13508	389 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	HYAL4	Q2M3T9	481 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	GRAMD1B	Q3KR37	738 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	COX20	Q5RI15	118 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	MISP	Q8IVT2	679 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	MSRB3	Q8IXL7	192 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	METTL25	Q8N6Q8	603 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	POU5F2	Q8N7G0	328 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	OR1J4	Q8NGS1	313 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	RNF138	Q8WVD3	245 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	JSRP1	Q96MG2	331 aa	Predicted RBP	13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TAAR6	Q96RI8	345 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	TUBA8	Q9NY65	449 aa	Predicted RBP	13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	WDR45	Q9Y484	360 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	WIF1	Q9Y5W5	379 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	CFAP46	Q8IYW2	2715 aa		13.53	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	EXPH5	Q8NEV8	1989 aa		13.52	□□□□□ -0.24
LAMTOR4-210	ENST00000488338	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338		A0A1W2PQD3	144 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	ALG1L2	C9J202	215 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	SLC28A2	O43868	658 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	CBR3	O75828	277 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	C1QL1	O75973	258 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	OXSR1	O95747	527 aa	Predicted RBP	13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	BMP2	P12643	396 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	GPX2	P18283	190 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	DCT	P40126	519 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	CRISP3	P54108	245 aa		13.52	□□□□□ -0.25
LAMTOR4-210	ENST00000488338	MLLT10	P55197	1068 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms