RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IL7P13232 177 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 FPR3P25089 353 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 RFX2P48378 723 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 LTB4RQ15722 352 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 EOGTQ5NDL2 527 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 MFSD12Q6NUT3 480 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ABHD13Q7L211 337 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 NRARPQ7Z6K4 114 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 POGLUT1Q8NBL1 392 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 TM9SF4Q92544 642 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 UFD1Q92890 307 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ARHGAP9Q9BRR9 750 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 TRPV5Q9NQA5 729 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ACTR10Q9NZ32 417 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 HS3ST3A1Q9Y663 406 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 TRBV23OR9-2A0A075B6M9 112 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 GABRA5P31644 462 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ACSL1P33121 698 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 HTR3AP46098 478 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ASAH1Q13510 395 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ARMC4Q5T2S8 1044 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 C22orf42Q6IC83 251 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ZNF730Q6ZMV8 503 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 USP53Q70EK8 1073 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 RRM2BQ7LG56 351 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 HMGN2P46Q86SG4 172 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 VRK2Q86Y07 508 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 TRIM48Q8IWZ4 208 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 GDPD1Q8N9F7 314 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 OR52P1PQ8NH57 321 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ACOT11Q8WXI4 607 aaPredicted RBP24.38■■□□□ 1.49
HLA-C-208ENST00000487245 OSTF1Q92882 214 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 RFKQ969G6 155 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 FCRL4Q96PJ5 515 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 POLMQ9NP87 494 aaPredicted RBP24.38■■□□□ 1.49
HLA-C-208ENST00000487245 CTPS2Q9NRF8 586 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ZNF232Q9UNY5 417 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 GPR55Q9Y2T6 319 aaPredicted RBP24.38■■□□□ 1.49
HLA-C-208ENST00000487245 ENTPD2Q9Y5L3 495 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 KLF4O43474 513 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 COQ9O75208 318 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 LIMS3P0CW19 117 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 LIMS4P0CW20 117 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 RPS25P62851 125 aaKnown RBP24.37■■□□□ 1.49
HLA-C-208ENST00000487245 HNRNPA0Q13151 305 aaKnown RBP24.37■■□□□ 1.49
HLA-C-208ENST00000487245 BAK1Q16611 211 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 FCRL6Q6DN72 434 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 TMEM53Q6P2H8 277 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 AP3S1Q92572 193 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 SLC9A6Q92581 669 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 COQ7Q99807 217 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 QRSL1Q9H0R6 528 aaKnown RBP24.37■■□□□ 1.49
HLA-C-208ENST00000487245 LYRM4Q9HD34 91 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 PILRAQ9UKJ1 303 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 DAPP1Q9UN19 280 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 PIAS3Q9Y6X2 628 aa24.37■■□□□ 1.49
HLA-C-208ENST00000487245 FAM221BA6H8Z2 402 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 AP3D1O14617 1153 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 CCNKO75909 580 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 OR5F1O95221 314 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 SCN1BQ07699 218 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 ACSM1Q08AH1 577 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 ALG11Q2TAA5 492 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 C6orf132Q5T0Z8 1188 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 AADACL4Q5VUY2 407 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 OR2L13Q8N349 312 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 OR7G2Q8NG99 324 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 RSC1A1Q92681 617 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 JAM3Q9BX67 310 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 ABCB9Q9NP78 766 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 IL20Q9NYY1 176 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 GSTK1Q9Y2Q3 226 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 TRDV1A0A1B0GX56 115 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 TRAPPC2P0DI81 140 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 TRAPPC2BP0DI82 140 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 POLR2CP19387 275 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-208ENST00000487245 NDUFV2P19404 249 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 RPS5P46782 204 aaKnown RBP24.36■■□□□ 1.49
HLA-C-208ENST00000487245 TPMTP51580 245 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 ILF3Q12906 894 aaKnown RBP eCLIP24.36■■□□□ 1.493e-17■□□□□ 9.4
HLA-C-208ENST00000487245 RUNX2Q13950 521 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 ARHGAP11BQ3KRB8 267 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 ZMAT1Q5H9K5 638 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 OR2G6Q5TZ20 316 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 RAB43Q86YS6 212 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 ZNF486Q96H40 463 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-208ENST00000487245 TEX12Q9BXU0 123 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 EXOGQ9Y2C4 368 aaKnown RBP24.36■■□□□ 1.49
HLA-C-208ENST00000487245 SLC22A7Q9Y694 548 aa24.36■■□□□ 1.49
HLA-C-208ENST00000487245 OR6C74A6NCV1 312 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 CTSVO60911 334 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 CLEC2LP0C7M8 214 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 GSTT2P0CG29 244 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 GSTT2BP0CG30 244 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 DLX2Q07687 328 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-208ENST00000487245 TCEA2Q15560 299 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 MANEAQ5SRI9 462 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 DDI2Q5TDH0 399 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 ZNF517Q6ZMY9 492 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-208ENST00000487245 PEX5LQ8IYB4 626 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms