RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 KCNK2O95069 426 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 ONECUT2O95948 504 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 HEXBP07686 556 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 CYC1P08574 325 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 NID1P14543 1247 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 ATF4P18848 351 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 RPS4Y1P22090 263 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 RGS8P57771 180 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 TAS2R41P59536 307 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 DCAF7P61962 342 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 PSG6Q00889 435 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 E2F1Q01094 437 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 MC2RQ01718 297 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 ZFP36L1Q07352 338 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 KCNAB2Q13303 367 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 GANABQ14697 944 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 NSDHLQ15738 373 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 C11orf91Q3C1V1 193 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 FLYWCH1Q4VC44 716 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 VWA2Q5GFL6 755 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 FGD3Q5JSP0 725 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 CCNJQ5T5M9 372 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 HLA-DQA1Q5Y7H0 255 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 AP1ARQ63HQ0 302 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 PWWP2BQ6NUJ5 590 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 TCTN3Q6NUS6 607 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 FAHD1Q6P587 224 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF836Q6ZNA1 936 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 RBM44Q6ZP01 1051 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 USP51Q70EK9 711 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 OLIG3Q7RTU3 272 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 OVCH1Q7RTY7 1134 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 RANBP3LQ86VV4 465 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 VRK2Q86Y07 508 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF615Q8N8J6 731 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 MORN4Q8NDC4 146 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 OR4C15Q8NGM1 316 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 OR52J3Q8NH60 311 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 C16orf52Q8NHV5 167 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 STT3BQ8TCJ2 826 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 OIT3Q8WWZ8 545 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 METTL21AQ8WXB1 218 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 PIK3R3Q92569 461 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 TSLPQ969D9 159 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 RMND5BQ96G75 393 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 SENP5Q96HI0 755 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 DHRS1Q96LJ7 313 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 VSTM2LQ96N03 204 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 CDC6Q99741 560 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 STRADBQ9C0K7 418 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 POLR2J2Q9GZM3 115 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 VN1R1Q9GZP7 353 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 QRSL1Q9H0R6 528 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 ING2Q9H160 280 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 POLR2J3Q9H1A7 115 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 RIBC2Q9H4K1 309 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 NMNAT1Q9HAN9 279 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 TMEM9BQ9NQ34 198 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 FBXO8Q9NRD0 319 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 UBAP1Q9NZ09 502 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 COPS7AQ9UBW8 275 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 GPN3Q9UHW5 284 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 TMEFF2Q9UIK5 374 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 CBLCQ9ULV8 474 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 MGAT4BQ9UQ53 548 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 MYRFQ9Y2G1 1151 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 FER1L5A0AVI2 2057 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 COL6A3P12111 3177 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 A0A1W2PRQ8 180 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 FAM86C2PA6NEL3 165 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OR2W5A6NFC9 320 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OR6C76A6NM76 312 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 B4E171 279 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 HRKO00198 91 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 BCKDKO14874 412 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PCDH17O14917 1159 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SEC24DO94855 1032 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OR5F1O95221 314 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ZIC2O95409 532 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 KLK3P07288 261 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 GNAO1P09471 354 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ZGLP1P0C6A0 271 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ELAVL4P26378 380 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 LCN1P31025 176 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 CCKBRP32239 447 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PIGAP37287 484 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 IFNGR2P38484 337 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 TSPAN7P41732 249 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PPICP45877 212 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 LIMS1P48059 325 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 RFX3P48380 749 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 UGT2B15P54855 530 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SLC37A1P57057 533 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 EEF1A1P68104 462 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PSPHP78330 225 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 MYBPC1Q00872 1141 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ST3GAL3Q11203 375 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 NPRL3Q12980 569 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ILKQ13418 452 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms