RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 WBP2NLQ6ICG8 309 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SLC25A47Q6Q0C1 308 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CEACAM20Q6UY09 585 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 TMEM26Q6ZUK4 368 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ACOT1Q86TX2 421 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ERICH1Q86X53 443 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SAMD14Q8IZD0 417 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 MCOLN2Q8IZK6 566 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 LRRC43Q8N309 656 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SLC43A2Q8N370 569 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 PDCL2Q8N4E4 241 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 RFLNBQ8N5W9 214 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 C12orf29Q8N999 325 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 TMEM178AQ8NBL3 297 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CCDC197Q8NCU1 140 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 TRIM58Q8NG06 486 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 OR4L1Q8NH43 312 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 GPR148Q8TDV2 347 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CTNNBL1Q8WYA6 563 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SMPDL3AQ92484 453 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 DYRK2Q92630 601 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 BADQ92934 168 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF689Q96CS4 500 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 GIMAP5Q96F15 307 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 MARK4Q96L34 752 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 TAAR6Q96RI8 345 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SSX3Q99909 188 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ACBD6Q9BR61 282 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 FUNDC2Q9BWH2 189 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 UBXN6Q9BZV1 441 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ATG10Q9H0Y0 220 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CWH43Q9H720 699 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 HOMER3Q9NSC5 361 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CNOT2Q9NZN8 540 aaKnown RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ADAM22Q9P0K1 906 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF319Q9P2F9 582 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 HMGXB4Q9UGU5 601 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 MRTO4Q9UKD2 239 aaKnown RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CDH9Q9ULB4 789 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 MICAL3Q7RTP6 2002 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 MYBPHLA2RUH7 354 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 TMEM89A2RUT3 159 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SIGLEC16A6NMB1 481 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 I3L4J1 428 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 HCRTO43612 131 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 BUB1O43683 1085 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 NME2P1O60361 137 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 NOL3O60936 208 aaKnown RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 LRP3O75074 770 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 PALMO75781 387 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 CLPTM1O96005 669 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 TPBGLP0DKB5 382 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 GNSP15586 552 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 FUT1P19526 365 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 AADACP22760 399 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 DNAJB1P25685 340 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 PKLRP30613 574 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 CASQ1P31415 396 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SOX3P41225 446 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 TNFRSF4P43489 277 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 OR3A2P47893 321 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 RPL34P49207 117 aaKnown RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SLC11A1P49279 550 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 FOXG1P55316 489 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 XGP55808 180 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 GSCP56915 257 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 LINC01547P58512 204 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 DEFB103AP81534 67 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 POU3F1Q03052 451 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 DPYSQ14117 519 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 GOLGA7BQ2TAP0 167 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 GPAT3Q53EU6 434 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ATP1A1-AS1Q5TC04 95 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 LIN9Q5TKA1 542 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 NKAIN2Q5VXU1 208 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SLC35E4Q6ICL7 350 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SYT10Q6XYQ8 523 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 PAQR9Q6ZVX9 377 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 CYP4V2Q6ZWL3 525 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 BNIPLQ7Z465 357 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ADGRD2Q7Z7M1 963 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 TMEM110Q86TL2 294 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SYVN1Q86TM6 617 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SYCE1Q8N0S2 351 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ELMOD1Q8N336 334 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SLC35F6Q8N357 371 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 OR56B1Q8NGI3 324 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 UBA3Q8TBC4 463 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 PHOSPHO2Q8TCD6 241 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SLC2A14Q8TDB8 520 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 FCGR1BQ92637 280 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 CASP10Q92851 521 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 RAB39BQ96DA2 213 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 C14orf79Q96F83 325 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 HSFY1Q96LI6 401 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 C2orf48Q96LS8 159 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 GPR137Q96N19 417 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 DOCK7Q96N67 2140 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ALS2CR12Q96Q35 445 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms