RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 GPR18Q14330 331 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 COL19A1Q14993 1142 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 LARS2Q15031 903 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 DUSP5Q16690 384 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 ALG11Q2TAA5 492 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 FLYWCH1Q4VC44 716 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 ZNF836Q6ZNA1 936 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 MBOAT2Q6ZWT7 520 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 ABHD13Q7L211 337 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 SIMC1Q8NDZ2 872 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 TOR1AIP2Q8NFQ8 470 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 OR10G6Q8NH81 332 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 RIPOR3Q96MK2 946 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 NELL2Q99435 816 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 SDHCQ99643 169 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 CCDC32Q9BV29 185 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 ISYNA1Q9NPH2 558 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 SNTG1Q9NSN8 517 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 IL20Q9NYY1 176 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 EXOSC1Q9Y3B2 195 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 OR6C74A6NCV1 312 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 DLGAP3O95886 979 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 GNSP15586 552 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 HTR4Q13639 388 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 ZNF628Q5EBL2 1059 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 CLEC12AQ5QGZ9 265 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 OR4Q3Q8NH05 313 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 LYRM4Q9HD34 91 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 TMEM74BQ9NUR3 256 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 TXNL4BQ9NX01 149 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 SCN3AQ9NY46 2000 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 TRAPPC4Q9Y296 219 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 SPIN1Q9Y657 262 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 LOC105369274A0A096LPK9 316 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 LOC102723532A0A0G2JNH3 316 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 APOL3O95236 402 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 TSPAN19P0C672 248 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 LTBRP36941 435 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 DEFA1P59665 94 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 DEFA3P59666 94 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 YPEL5P62699 121 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 EEF1A1P68104 462 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 DUSP8Q13202 625 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 EIPR1Q53HC9 387 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 FHL5Q5TD97 284 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 OR2G6Q5TZ20 316 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 C11orf74Q86VG3 221 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 LAPTM4BQ86VI4 370 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 TRIM48Q8IWZ4 208 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 NRMQ8IXM6 262 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 OR4N4Q8N0Y3 316 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 POGLUT1Q8NBL1 392 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 TMEM255BQ8WV15 326 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 SDF2Q99470 211 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 ZFYVE21Q9BQ24 234 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 TEX12Q9BXU0 123 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 PIGUQ9H490 435 aa16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 C19orf53Q9UNZ5 99 aaPredicted RBP16.77■□□□□ 0.28
PDLIM7-207ENST00000486828 IQCMA0A1B0GVH7 501 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 SURF4O15260 269 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 IL1AP01583 271 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 THBS1P07996 1170 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 NDUFV2P19404 249 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 GPR4P46093 362 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 EIF2B2P49770 351 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 MRPS21P82921 87 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 RUNX1T1Q06455 604 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 TPBGQ13641 420 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 TMEM44Q2T9K0 475 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 TRMT12Q53H54 448 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 SLC30A6Q6NXT4 461 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF620Q6ZNG0 422 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 ZFPM2Q8WW38 1151 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 RSC1A1Q92681 617 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 WDFY2Q96P53 400 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 KLHL25Q9H0H3 589 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 MED17Q9NVC6 651 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 NLGN3Q9NZ94 848 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 LRRC72A6NJI9 287 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 PIP5K1CO60331 668 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 KCNK2O95069 426 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 SPNP16150 400 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 DRD1P21728 446 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 AKT2P31751 481 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 TPMTP51580 245 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF136P52737 540 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 CDH11P55287 796 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 PGGHGQ32M88 737 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 PLK5Q496M5 336 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 EXOSC6Q5RKV6 272 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 AADACL4Q5VUY2 407 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 GALNT6Q8NCL4 622 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 ASB15Q8WXK1 588 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 TM9SF4Q92544 642 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 HPS1Q92902 700 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 RFKQ969G6 155 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 RERGQ96A58 199 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 SLC25A46Q96AG3 418 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF350Q9GZX5 532 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms