RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TEX10Q9NXF1 929 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 TRMT1Q9NXH9 659 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 EIF3LQ9Y262 564 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 C15orf41Q9Y2V0 281 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SLC6A5Q9Y345 797 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 RNF114Q9Y508 228 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 NIPBLQ6KC79 2804 aaeCLIP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 NBEAL1Q6ZS30 2694 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF407Q9C0G0 2248 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 A0A0A6YYD5 115 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SH3D21A4FU49 640 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 GLOD5A6NK44 160 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 KDM4EB2RXH2 506 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CCDC188H7C350 402 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 UBXN8O00124 270 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 EIF3HO15372 352 aaKnown RBP eCLIP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 UGDHO60701 494 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 KERAO60938 352 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 PRKRAO75569 313 aaKnown RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 PIAS1O75925 651 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 AIFM1O95831 613 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ACTL6AO96019 429 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 FAM58BPP0C7Q3 252 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 GAAP10253 952 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 BMP7P18075 431 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 NT5EP21589 574 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 PIK3R1P27986 724 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CRABP2P29373 138 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SSTR1P30872 391 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SPRP35270 261 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CASP3P42574 277 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 PAFAH1B1P43034 410 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 PIK3CGP48736 1102 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 MAP2K6P52564 334 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 DIO3P55073 304 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 RPS13P62277 151 aaKnown RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 EEF1A1P68104 462 aaKnown RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 NKX6-1P78426 367 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CALCOCO2Q13137 446 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CUL3Q13618 768 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SLMAPQ14BN4 828 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ZKSCAN8Q15776 578 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 EIPR1Q53HC9 387 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 GRTP1Q5TC63 336 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 EEF1A1P5Q5VTE0 462 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 LIPJQ5W064 366 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 TIGD3Q6B0B8 471 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 OR52E8Q6IFG1 317 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ENPP6Q6UWR7 440 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CLEC9AQ6UXN8 241 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 TMEM64Q6YI46 380 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CYS1Q717R9 158 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 Q71RC1 249 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ISCA2Q86U28 154 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 NUDT13Q86X67 352 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 P3H2Q8IVL5 708 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CTAGE3PQ8IX95 158 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 TEX9Q8N6V9 391 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF441Q8N8Z8 693 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 C17orf47Q8NEP4 570 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 OR7G1Q8NGA0 311 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 OR1J4Q8NGS1 313 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ZPLD1Q8TCW7 415 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 UBTD2Q8WUN7 234 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SNX33Q8WV41 574 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SMPDL3BQ92485 455 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 NTNG2Q96CW9 530 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 WDYHV1Q96HA8 205 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 TMEM41AQ96HV5 264 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 UBXN10Q96LJ8 280 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SFXN3Q9BWM7 321 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 UGT2B28Q9BY64 529 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 PIGMQ9H3S5 423 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 DDX31Q9H8H2 851 aaKnown RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CXorf21Q9HAI6 301 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 SMYD2Q9NRG4 433 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 JKAMPQ9P055 326 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 FETUBQ9UGM5 382 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 NDRG3Q9UGV2 375 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CDC42EP3Q9UKI2 254 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 CFL2Q9Y281 166 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 TSC22D4Q9Y3Q8 395 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 ASB4Q9Y574 426 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 HCFC1P51610 2035 aa5.34□□□□□ -1.55
CSDE1-207ENST00000483407 PHF3Q92576 2039 aaKnown RBP5.34□□□□□ -1.55
CSDE1-207ENST00000483407 DNAJC13O75165 2243 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 TCRBV9S1A1TA0A576 114 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 CCDC189A1A4V9 331 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 CXorf49A8MYA2 514 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-207ENST00000483407 H0Y3Z8 333 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 H0YIV9 168 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 FOXE1O00358 373 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-207ENST00000483407 TMPRSS11DO60235 418 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 SMPD2O60906 423 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 GUCY1B2O75343 617 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 EEDO75530 441 aaKnown RBP5.33□□□□□ -1.56
CSDE1-207ENST00000483407 SEMA3DO95025 777 aa5.33□□□□□ -1.56
CSDE1-207ENST00000483407 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
CSDE1-207ENST00000483407 CLPSP04118 112 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms