RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 LY6G6FQ5SQ64 297 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 C19orf35Q6ZS72 473 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 GSPT2Q8IYD1 628 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 SLC25A41Q8N5S1 370 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SLC44A5Q8NCS7 719 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 OR1L6Q8NGR2 347 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SCARB1Q8WTV0 552 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 IRGQQ8WZA9 623 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 DPF1Q92782 380 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 MYEOVQ96EZ4 313 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PRRC1Q96M27 445 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TMEM79Q9BSE2 394 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SGK2Q9HBY8 427 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NUDT15Q9NV35 164 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 VPS54Q9P1Q0 977 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 LOXL2Q9Y4K0 774 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NEUROG3Q9Y4Z2 214 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 INSL6Q9Y581 213 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SPIN1Q9Y657 262 aaPredicted RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 SLCO1B1Q9Y6L6 691 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 IGLV3-22A0A075B6J6 115 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 SMIM35A0A1B0GVV1 85 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 HEATR9A2RTY3 570 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 CD8B2A6NJW9 211 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 ZW10O43264 779 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 RAD51DO75771 328 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 KLHL2O95198 593 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 KRT3P12035 628 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 PTNP21246 168 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 CHATP28329 748 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 HSD17B3P37058 310 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 NR0B1P51843 470 aaKnown RBP2.96□□□□□ -1.93
SMC6-208ENST00000481708 HNRNPH2P55795 449 aaKnown RBP2.96□□□□□ -1.93
SMC6-208ENST00000481708 IL18Q14116 193 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 TMEM119Q4V9L6 283 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 ABHD17BQ5VST6 288 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 MLIPQ5VWP3 458 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 RNASEKQ6P5S7 137 aaKnown RBP2.96□□□□□ -1.93
SMC6-208ENST00000481708 C17orf107Q6ZR85 190 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 CATSPER1Q8NEC5 780 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 SLC38A5Q8WUX1 472 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 WDR77Q9BQA1 342 aaPredicted RBP2.96□□□□□ -1.93
SMC6-208ENST00000481708 RBM24Q9BX46 236 aaKnown RBP2.96□□□□□ -1.93
SMC6-208ENST00000481708 HINT2Q9BX68 163 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 UPF3BQ9BZI7 483 aaKnown RBP2.96□□□□□ -1.93
SMC6-208ENST00000481708 A4GALTQ9NPC4 353 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 PRSS16Q9NQE7 514 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 SEMA4GQ9NTN9 838 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 CDH9Q9ULB4 789 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 POLDIP2Q9Y2S7 368 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 ASPMQ8IZT6 3477 aa2.96□□□□□ -1.93
SMC6-208ENST00000481708 FRYQ5TBA9 3013 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 DIRC3C9JPN6 131 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 LATO43561 262 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 S100A6P06703 90 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 STAG3L2P0CL84 134 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CCL2P13500 99 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 IL9P15248 144 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 ZNF10P21506 573 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 FBLP22087 321 aaKnown RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 OXTRP30559 389 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 RDXP35241 583 aaKnown RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 CFHR2P36980 270 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 ARHGDIAP52565 204 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CSNK2A1P68400 391 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 IRX4P78413 519 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 EWSR1Q01844 656 aaKnown RBP eCLIP2.96□□□□□ -1.94
SMC6-208ENST00000481708 IL10RBQ08334 325 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 ILF2Q12905 390 aaKnown RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 HNF4GQ14541 408 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 SYPL1Q16563 259 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 MICBQ29980 383 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 SLX4IPQ5VYV7 408 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 KCNIP4Q6PIL6 250 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CCDC60Q8IWA6 550 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 CSNK2A3Q8NEV1 391 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 NDNFQ8TB73 568 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 MARCH1Q8TCQ1 289 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 GLYATL2Q8WU03 294 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 Q96MF0 132 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 TSSK2Q96PF2 358 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 BBC3Q96PG8 261 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 TTYH2Q9BSA4 534 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CHID1Q9BWS9 393 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 SPATA16Q9BXB7 569 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 NARFLQ9H6Q4 476 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 SMPD4Q9NXE4 827 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 SATB2Q9UPW6 733 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 OR1A2Q9Y585 309 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 WDFY4Q6ZS81 3184 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CXorf51AA0A1B0GTR3 108 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 NDUFB10O96000 172 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 EGR2P11161 476 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 GPX3P22352 226 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CDH6P55285 790 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 TAS2R38P59533 333 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 SELENOVP59797 346 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 BTG1P62324 171 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 OTUD4Q01804 1114 aaKnown RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 TAF10Q12962 218 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms