RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZNF565Q8N9K5 539 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 GANCQ8TET4 914 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 GCDHQ92947 438 aaPredicted RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 EXOSC8Q96B26 276 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 ART5Q96L15 291 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 OR2A7Q96R45 310 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 C7orf50Q9BRJ6 194 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 PRDM5Q9NQX1 630 aaPredicted RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 RCE1Q9Y256 329 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 LRRN3E7EW58 273 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 PRAMEF4O60810 478 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 RGS9O75916 674 aaPredicted RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 PAICSP22234 425 aaKnown RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 GDNFP39905 211 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 NR0B1P51843 470 aaKnown RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 PRAMEF9Q5VWM5 478 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 RBM45Q8IUH3 476 aaKnown RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 FAM71CQ8NEG0 241 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 SLC35A5Q9BS91 424 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 LRRN3Q9H3W5 708 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 HMX1Q9NP08 348 aaPredicted RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 AKAP7Q9P0M2 348 aaPredicted RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 SEPT4O43236 478 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 PRODHO43272 600 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 ICOSLGO75144 302 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 FBP1P09467 338 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 ZNF286BP0CG31 522 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 PSMB1P20618 241 aaKnown RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 ACHEP22303 614 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 EEF1A2Q05639 463 aaKnown RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 ZC3H14Q6PJT7 736 aaKnown RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 IGSF8Q969P0 613 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 MVB12BQ9H7P6 319 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 ZNF334Q9HCZ1 680 aaPredicted RBP19.93■□□□□ 0.78
SDF4-206ENST00000478938 TMEM248Q9NWD8 314 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 TTC3P53804 2025 aa19.93■□□□□ 0.78
SDF4-206ENST00000478938 A0A1B0GW55 424 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 PRMT3O60678 531 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DUX4L2P0CJ85 424 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DUX4L3P0CJ86 424 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DUX4L4P0CJ87 422 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DUX4L5P0CJ88 424 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DUX4L6P0CJ89 424 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DUX4L7P0CJ90 424 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 GIPRP48546 466 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 HBA1P69905 142 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 LRRC74AQ0VAA2 488 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 STX4Q12846 297 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 HABP2Q14520 560 aaPredicted RBP19.92■□□□□ 0.78
SDF4-206ENST00000478938 ZXDCQ2QGD7 858 aaPredicted RBP19.92■□□□□ 0.78
SDF4-206ENST00000478938 RPS26P11Q5JNZ5 115 aaPredicted RBP19.92■□□□□ 0.78
SDF4-206ENST00000478938 RTP2Q5QGT7 225 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 GLDNQ6ZMI3 551 aaPredicted RBP19.92■□□□□ 0.78
SDF4-206ENST00000478938 OR4D9Q8NGE8 314 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 OR52B4Q8NGK2 314 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 OR5M1Q8NGP8 315 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 GINS4Q9BRT9 223 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 PBX4Q9BYU1 374 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 ASB6Q9NWX5 421 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DUX4Q9UBX2 424 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 PRSS21Q9Y6M0 314 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 PLXNA4Q9HCM2 1894 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 HMSDA8MTL9 139 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 RAMP2O60895 175 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 AQP8O94778 261 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 UBL3O95164 117 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 SLC25A14O95258 325 aaPredicted RBP19.92■□□□□ 0.78
SDF4-206ENST00000478938 GPX4P36969 197 aaPredicted RBP19.92■□□□□ 0.78
SDF4-206ENST00000478938 SLC6A11P48066 632 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 DGKGP49619 791 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 GPR143P51810 404 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 SERINC3Q13530 473 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 FRG2Q64ET8 278 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 SERINC5Q86VE9 423 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 ZNF683Q8IZ20 524 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 SPAG16Q8N0X2 631 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 CHST13Q8NET6 341 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 FRG2BQ96QU4 278 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 GMLQ99445 158 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 ORAI3Q9BRQ5 295 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 ADGRE3Q9BY15 652 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 MROH8Q9H579 483 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 CTPS2Q9NRF8 586 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 MRPS18AQ9NVS2 196 aaKnown RBP19.92■□□□□ 0.78
SDF4-206ENST00000478938 CKAP5Q14008 2032 aa19.92■□□□□ 0.78
SDF4-206ENST00000478938 TXNL1O43396 289 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 LCMT2O60294 686 aaKnown RBP19.91■□□□□ 0.78
SDF4-206ENST00000478938 C2orf68Q2NKX9 166 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 SLC25A30Q5SVS4 291 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 SMARCD3Q6STE5 483 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 GPC2Q8N158 579 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 CPXM2Q8N436 756 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 TBC1D19Q8N5T2 526 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 RGMAQ96B86 450 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 MTERF1Q99551 399 aaKnown RBP19.91■□□□□ 0.78
SDF4-206ENST00000478938 PLA2G12AQ9BZM1 189 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 SLC32A1Q9H598 525 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 ZNF282Q9UDV7 671 aaPredicted RBP19.91■□□□□ 0.78
SDF4-206ENST00000478938 OPN4Q9UHM6 478 aa19.91■□□□□ 0.78
SDF4-206ENST00000478938 PTCH2Q9Y6C5 1203 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms