RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 C15orf41Q9Y2V0 281 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 MAST4O15021 2626 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 CACNA1CQ13936 2221 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 ITPR2Q14571 2701 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 TRGV5A0A0B4J1U4 118 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 PRAMEF25A6NGN4 478 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 CAPN14A8MX76 684 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 PRSS44E7EML9 344 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 RRP9O43818 475 aaKnown RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 IL6P05231 212 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 ACP2P11117 423 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 TCEA1P23193 301 aaKnown RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 PRDX6P30041 224 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 MAN2A2P49641 1150 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 TMED10P49755 219 aaKnown RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 PRKAG1P54619 331 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 GAS1P54826 345 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 DCAF7P61962 342 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 KRT72Q14CN4 511 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 WIPI1Q5MNZ9 446 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 BLOC1S3Q6QNY0 202 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 PLXDC2Q6UX71 529 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 YRDCQ86U90 279 aaKnown RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 NATD1Q8N6N6 113 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 OR9I1Q8NGQ6 314 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 RP9Q8TA86 221 aaKnown RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 ZNF764Q96H86 408 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 TMEM41AQ96HV5 264 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 OSBPL11Q9BXB4 747 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 ATAD3AQ9NVI7 634 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 FBXO34Q9NWN3 711 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 TAS2R9Q9NYW1 312 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 KLRF1Q9NZS2 232 aa16.1■□□□□ 0.17
PTPN7-209ENST00000477554 SUCOQ9UBS9 1254 aaKnown RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 PHF3Q92576 2039 aaKnown RBP16.1■□□□□ 0.17
PTPN7-209ENST00000477554 OR6C70A6NIJ9 312 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 E9PLN8 166 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 AQP7O14520 342 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 SNPHO15079 494 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 TRAPPC6AO75865 159 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 BCAS2O75934 225 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-209ENST00000477554 C1QCP02747 245 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 SNRPB2P08579 225 aaKnown RBP16.09■□□□□ 0.17
PTPN7-209ENST00000477554 PRF1P14222 555 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 NAGAP17050 411 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 IL12AP29459 219 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 GPC1P35052 558 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 MAP3K8P41279 467 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 RFX3P48380 749 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 MASP1P48740 699 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 MANFP55145 182 aaKnown RBP16.09■□□□□ 0.17
PTPN7-209ENST00000477554 NUP107P57740 925 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 CYLC2Q14093 348 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-209ENST00000477554 RCAN2Q14206 197 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 TIGD3Q6B0B8 471 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 C6orf89Q6UWU4 347 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 CAMKMTQ7Z624 323 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 CCDC71Q8IV32 467 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-209ENST00000477554 FUNDC1Q8IVP5 155 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 CLEC4FQ8N1N0 589 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 NEIL3Q8TAT5 605 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 RNF138Q8WVD3 245 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 SECISBP2Q96T21 854 aaKnown RBP16.09■□□□□ 0.17
PTPN7-209ENST00000477554 KLHDC3Q9BQ90 382 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 VKORC1Q9BQB6 163 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 EXO5Q9H790 373 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 CXorf36Q9H7Y0 433 aa16.09■□□□□ 0.17
PTPN7-209ENST00000477554 CACNA1DQ01668 2161 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 C9JVG2 144 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 SUSD5O60279 629 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 S100A3P33764 101 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 GABRA3P34903 492 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 PMPCAQ10713 525 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 STX5Q13190 355 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 CPTPQ5TA50 214 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 APOOLQ6UXV4 268 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 SEM1Q6ZVN7 128 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 SZRD1Q7Z422 152 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 PACS2Q86VP3 889 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 TREML1Q86YW5 311 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 ZNF808Q8N4W9 903 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-209ENST00000477554 SLC16A11Q8NCK7 471 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 FAM83FQ8NEG4 500 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-209ENST00000477554 NUP43Q8NFH3 380 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 OR8J2Q8NGG1 315 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 COQ8BQ96D53 544 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 SPDL1Q96EA4 605 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 LMF2Q9BU23 707 aaKnown RBP16.08■□□□□ 0.16
PTPN7-209ENST00000477554 ACKR4Q9NPB9 350 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 ALKBH4Q9NXW9 302 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 CBLCQ9ULV8 474 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 OR10H1Q9Y4A9 318 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 NAV2Q8IVL1 2488 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 CSMD2Q7Z408 3487 aa16.08■□□□□ 0.16
PTPN7-209ENST00000477554 CCDC154A6NI56 674 aa16.07■□□□□ 0.16
PTPN7-209ENST00000477554 NR5A2O00482 541 aa16.07■□□□□ 0.16
PTPN7-209ENST00000477554 CFLARO15519 480 aa16.07■□□□□ 0.16
PTPN7-209ENST00000477554 SCO2O43819 266 aa16.07■□□□□ 0.16
PTPN7-209ENST00000477554 COQ9O75208 318 aa16.07■□□□□ 0.16
PTPN7-209ENST00000477554 SNX4O95219 450 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms