RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DTX2Q86UW9 622 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 STK32CQ86UX6 486 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 SLC44A2Q8IWA5 706 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-213ENST00000476777 CCDC116Q8IYX3 515 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 CENPLQ8N0S6 344 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-213ENST00000476777 STEAP2Q8NFT2 490 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 KBTBD8Q8NFY9 601 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 OR10H5Q8NGA6 315 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 OR52B6Q8NGF0 335 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 UHMK1Q8TAS1 419 aaKnown RBP10.14□□□□□ -0.79
BRCA1-213ENST00000476777 PYROXD1Q8WU10 500 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 KCTD4Q8WVF5 259 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 KAT2AQ92830 837 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 TNFRSF13CQ96RJ3 184 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 PRRG4Q9BZD6 226 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 TRIM31Q9BZY9 425 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 TRIM2Q9C040 744 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 GRIP2Q9C0E4 1043 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 ESRP2Q9H6T0 727 aaKnown RBP10.14□□□□□ -0.79
BRCA1-213ENST00000476777 PTGES2Q9H7Z7 377 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 NOL11Q9H8H0 719 aaKnown RBP10.14□□□□□ -0.79
BRCA1-213ENST00000476777 FOLH1BQ9HBA9 442 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 FLRT3Q9NZU0 649 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 LPAR3Q9UBY5 353 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 UTS2RQ9UKP6 389 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 ZNF780BQ9Y6R6 833 aa10.14□□□□□ -0.79
BRCA1-213ENST00000476777 FAM234BA2RU67 622 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 SHISA8B8ZZ34 492 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 EIF1AYO14602 144 aaKnown RBP10.13□□□□□ -0.79
BRCA1-213ENST00000476777 SSX4O60224 188 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 GCM2O75603 506 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-213ENST00000476777 ALDH9A1P49189 494 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 CASP9P55211 416 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 LOXL1Q08397 574 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-213ENST00000476777 TSC22D1Q15714 1073 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 TAB1Q15750 504 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 ERCC6LQ2NKX8 1250 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 GRTP1Q5TC63 336 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 MFSD12Q6NUT3 480 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 METTL2BQ6P1Q9 378 aaKnown RBP10.13□□□□□ -0.79
BRCA1-213ENST00000476777 FIGNL1Q6PIW4 674 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 SEZ6L2Q6UXD5 910 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 KLHL7Q8IXQ5 586 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 OR9A2Q8NGT5 310 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 OR10D3Q8NH80 312 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 DUSP19Q8WTR2 217 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 ADGRG7Q96K78 797 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 FAIM2Q9BWQ8 316 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 HDHD5Q9BXW7 423 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 SDHAF3Q9NRP4 125 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 GLRX2Q9NS18 164 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 MCTS1Q9ULC4 181 aaKnown RBP10.13□□□□□ -0.79
BRCA1-213ENST00000476777 SNX12Q9UMY4 172 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 ABCG2Q9UNQ0 655 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 B3GALT5Q9Y2C3 310 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 OR10H1Q9Y4A9 318 aa10.13□□□□□ -0.79
BRCA1-213ENST00000476777 TNPO3Q9Y5L0 923 aaKnown RBP10.13□□□□□ -0.79
BRCA1-213ENST00000476777 IGLV3-32A0A0A0MS00 114 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 CCDC189A1A4V9 331 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 DPRXA6NFQ7 191 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ADAMDEC1O15204 470 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 PLOD3O60568 738 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ADH6P28332 368 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 AGTR1P30556 359 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ARL1P40616 181 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-213ENST00000476777 CCNG1P51959 295 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 TRA2BP62995 288 aaKnown RBP10.12□□□□□ -0.79
BRCA1-213ENST00000476777 PSG6Q00889 435 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 IRF9Q00978 393 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 BSPH1Q075Z2 132 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 IFT88Q13099 833 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 TRAF3Q13114 568 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ACAP2Q15057 778 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 NRF1Q16656 503 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 SGO1Q5FBB7 561 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 LGSNQ5TDP6 509 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 TTC19Q6DKK2 380 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-213ENST00000476777 C3orf62Q6ZUJ4 267 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 MARCH3Q86UD3 253 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 EXOC3L1Q86VI1 746 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 LRRC8AQ8IWT6 810 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 CTAGE3PQ8IX95 158 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 GABRG1Q8N1C3 465 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ZNF619Q8N2I2 560 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 SLC35F6Q8N357 371 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ARIH2OSQ8N7S6 290 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 OR7G2Q8NG99 324 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 PIWIL2Q8TC59 973 aaKnown RBP10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ROBO4Q8WZ75 1007 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 HSD17B8Q92506 261 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ATP6V1E2Q96A05 226 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 SHARPINQ9H0F6 387 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ALG2Q9H553 416 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 C12orf49Q9H741 205 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 NGBQ9NPG2 151 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 FARSBQ9NSD9 589 aaKnown RBP10.12□□□□□ -0.79
BRCA1-213ENST00000476777 FAM120CQ9NX05 1096 aaKnown RBP10.12□□□□□ -0.79
BRCA1-213ENST00000476777 PAQR5Q9NXK6 330 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-213ENST00000476777 XPR1Q9UBH6 696 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 SLC12A4Q9UP95 1085 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms