RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SYT5O00445 386 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 TNFSF15O95150 251 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 GUSBP08236 651 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 IL7RP16871 459 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 RRM2P31350 389 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 DCTP40126 519 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 ZNF836Q6ZNA1 936 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 MARCH9Q86YJ5 346 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 HS3ST5Q8IZT8 346 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 APCDD1LQ8NCL9 501 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 OR5K1Q8NHB7 308 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 CT55Q8WUE5 264 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 SEMA4CQ9C0C4 833 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 WWTR1Q9GZV5 400 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 PPIEQ9UNP9 301 aaKnown RBP26.67■■□□□ 1.86
VEGFA-211ENST00000476772 SLC9A8Q9Y2E8 581 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 TESMINQ9Y4I5 508 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 CLDN24A6NM45 220 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 G3V2T6 193 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 DPM1O60762 260 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 UGT2B17O75795 530 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 DNAJB5O75953 348 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 RASAL1O95294 804 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 DBIP07108 87 aaKnown RBP26.66■■□□□ 1.86
VEGFA-211ENST00000476772 THBS1P07996 1170 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 DRD5P21918 477 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 LARS2Q15031 903 aaKnown RBP26.66■■□□□ 1.86
VEGFA-211ENST00000476772 HLA-DQA1Q5Y7H0 255 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 ZDHHC13Q8IUH4 622 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 SVOPLQ8N434 492 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 PMM1Q92871 262 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 G6PC3Q9BUM1 346 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 NRSN2Q9GZP1 204 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 REEP1Q9H902 201 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 SLC13A4Q9UKG4 626 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 ZNF232Q9UNY5 417 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 SAMHD1Q9Y3Z3 626 aaKnown RBP26.66■■□□□ 1.86
VEGFA-211ENST00000476772 ZNF292O60281 2723 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 EI24O14681 340 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 FOLR3P41439 243 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 DCAF7P61962 342 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 OTUD3Q5T2D3 398 aaPredicted RBP26.66■■□□□ 1.86
VEGFA-211ENST00000476772 DEF8Q6ZN54 512 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 STK32CQ86UX6 486 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 CLIP4Q8N3C7 705 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 ARHGDIGQ99819 225 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 RLIMQ9NVW2 624 aa26.66■■□□□ 1.86
VEGFA-211ENST00000476772 FAM32AQ9Y421 112 aaKnown RBP26.66■■□□□ 1.86
VEGFA-211ENST00000476772 LOC102723996A0A087X1L8 192 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 CEACAM1P13688 526 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 RHCEP18577 417 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 TCN2P20062 427 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 EEF1A1P68104 462 aaKnown RBP26.65■■□□□ 1.86
VEGFA-211ENST00000476772 SPIBQ01892 262 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 LIN52Q52LA3 116 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 TMPRSS12Q86WS5 348 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 CACTIN-AS1Q8N1I8 211 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 PACRGLQ8N7B6 248 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 OR6T1Q8NGN1 323 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 PIP5K1AQ99755 562 aa26.65■■□□□ 1.86
VEGFA-211ENST00000476772 ADAMDEC1O15204 470 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 FRS3O43559 492 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 SEMA7AO75326 666 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 CD63P08962 238 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 DNAJA1P31689 397 aaKnown RBP26.64■■□□□ 1.86
VEGFA-211ENST00000476772 RNF144AP50876 292 aaPredicted RBP26.64■■□□□ 1.86
VEGFA-211ENST00000476772 NOVA1P51513 510 aaKnown RBP26.64■■□□□ 1.86
VEGFA-211ENST00000476772 TAF11Q15544 211 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 DECR1Q16698 335 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 CPEB4Q17RY0 729 aaKnown RBP eCLIP26.64■■□□□ 1.86
VEGFA-211ENST00000476772 TCTN3Q6NUS6 607 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 SHQ1Q6PI26 577 aaKnown RBP26.64■■□□□ 1.86
VEGFA-211ENST00000476772 ZNF605Q86T29 641 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 ZNF441Q8N8Z8 693 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 EFHD2Q96C19 240 aaPredicted RBP26.64■■□□□ 1.86
VEGFA-211ENST00000476772 SDCCAG3Q96C92 435 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 VMP1Q96GC9 406 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 PCDHGA10Q9Y5H3 936 aa26.64■■□□□ 1.86
VEGFA-211ENST00000476772 RIF1Q5UIP0 2472 aaKnown RBP26.64■■□□□ 1.85
VEGFA-211ENST00000476772 CDC14CA4D256 554 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 NID1P14543 1247 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 FPR1P21462 350 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 NR0B1P51843 470 aaKnown RBP26.63■■□□□ 1.85
VEGFA-211ENST00000476772 SLC26A5P58743 744 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 RNF4P78317 190 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 NHLH1Q02575 133 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 GANABQ14697 944 aaKnown RBP26.63■■□□□ 1.85
VEGFA-211ENST00000476772 LAPTM4AQ15012 233 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 PCOLCEQ15113 449 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 BARD1Q99728 777 aaKnown RBP26.63■■□□□ 1.85
VEGFA-211ENST00000476772 C8orf4Q9NR00 106 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 KLHL28Q9NXS3 571 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 LYVE1Q9Y5Y7 322 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 C7orf72A4D263 438 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 FFAR1O14842 300 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 RAB40ALP0C0E4 278 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 CDH12P55289 794 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 RPS18P62269 152 aaKnown RBP26.63■■□□□ 1.85
VEGFA-211ENST00000476772 NPTX1Q15818 432 aa26.63■■□□□ 1.85
VEGFA-211ENST00000476772 PDZK1Q5T2W1 519 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms