RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SMURF1Q9HCE7 757 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 MED17Q9NVC6 651 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 FBXL21Q9UKT6 434 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 PAIP2BQ9ULR5 123 aaKnown RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 EXOSC1Q9Y3B2 195 aaKnown RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 CHST2Q9Y4C5 530 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 HS3ST3A1Q9Y663 406 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 ARHGEF17Q96PE2 2063 aaPredicted RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 COL6A3P12111 3177 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 KDM4EB2RXH2 506 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 CTDSP2O14595 271 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 AQP9O43315 295 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 B3GALT2O43825 422 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 GTF2E2P29084 291 aaKnown RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ACTR1BP42025 376 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 MTNR1AP48039 350 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 SEPHS1P49903 392 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 STARD6P59095 220 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ACTR1AP61163 376 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 LTB4RQ15722 352 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 C6orf132Q5T0Z8 1188 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 PLEKHM3Q6ZWE6 761 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 LAPTM4BQ86VI4 370 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 SIX5Q8N196 739 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 CAMKVQ8NCB2 501 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 FAM83FQ8NEG4 500 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ANKK1Q8NFD2 765 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 OR7G2Q8NG99 324 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 FLVCR1-AS1Q8TAF5 88 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ZFPM2Q8WW38 1151 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 RFKQ969G6 155 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 OR2A14Q96R47 310 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 KRCC1Q9NPI7 259 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 NLGN3Q9NZ94 848 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 GPR55Q9Y2T6 319 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 TRBV23OR9-2A0A075B6M9 112 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 PRAMEF26H0Y7S4 382 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 FCMRO60667 390 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 IL1AP01583 271 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 APOA1P02647 267 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 TNFSF8P32971 234 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ETV5P41161 510 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ETV1P50549 477 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 CCR5P51681 352 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 PDX1P52945 283 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 GAS1P54826 345 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 SRP54P61011 504 aaKnown RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 YPEL5P62699 121 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 LIPKQ5VXJ0 399 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 FRRS1Q6ZNA5 592 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ABI3BPQ7Z7G0 1075 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 SLC16A11Q8NCK7 471 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 SLC9A6Q92581 669 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 RNFT2Q96EX2 444 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 WDFY2Q96P53 400 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 MCHR1Q99705 422 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 TCEAL2Q9H3H9 227 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ANKRA2Q9H9E1 313 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 IL20Q9NYY1 176 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 DAPP1Q9UN19 280 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 ZNF443Q9Y2A4 671 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-208ENST00000476724 WDR45Q9Y484 360 aa15.36■□□□□ 0.05
TMEM53-208ENST00000476724 IGHV1OR15-9A0A0B4J2B8 117 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 IQCMA0A1B0GVH7 501 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 SLC35F4A4IF30 521 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 THBS1P07996 1170 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 TSPAN19P0C672 248 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 TRHRP34981 398 aaPredicted RBP15.35■□□□□ 0.05
TMEM53-208ENST00000476724 AVPR1BP47901 424 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 EIF2B2P49770 351 aaKnown RBP15.35■□□□□ 0.05
TMEM53-208ENST00000476724 ZP2Q05996 745 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 TPBGQ13641 420 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 PUS10Q3MIT2 529 aaKnown RBP15.35■□□□□ 0.05
TMEM53-208ENST00000476724 PLK5Q496M5 336 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 EIPR1Q53HC9 387 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 ZNF542PQ5EBM4 170 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 FAM111BQ6SJ93 734 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 PAQR6Q6TCH4 344 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 MBOAT2Q6ZWT7 520 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 ABHD13Q7L211 337 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 DEFB119Q8N690 84 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 COL26A1Q96A83 441 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 FCRL4Q96PJ5 515 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 ORAI3Q9BRQ5 295 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 PRR14Q9BWN1 585 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 LYRM4Q9HD34 91 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 WNT16Q9UBV4 365 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 GON4LQ3T8J9 2241 aa15.35■□□□□ 0.05
TMEM53-208ENST00000476724 TDRD6O60522 2096 aaKnown RBP15.35■□□□□ 0.05
TMEM53-208ENST00000476724 A6NCN8 305 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 DLGAP3O95886 979 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 MAGP20916 626 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 DUSP8Q13202 625 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 RUNX2Q13950 521 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 PRRT3Q5FWE3 981 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 FIGLAQ6QHK4 219 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 CLDN22Q8N7P3 220 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 OR8D4Q8NGM9 314 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 HTRA1Q92743 480 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 CDS1Q92903 461 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms