RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TMIGD1Q6UXZ0 262 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ENTHD1Q8IYW4 607 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 VAPAQ9P0L0 249 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 FCF1Q9Y324 198 aaKnown RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 COL2A1P02458 1487 aaPredicted RBP10.92□□□□□ -0.66
U2AF1-209ENST00000475639 hCG_1807616A0A1W2PRN6 198 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 WNT10BO00744 389 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 RNF13O43567 381 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF623O75123 536 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 B3GALNT1O75752 331 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 CFIP05156 583 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PRMT2P55345 433 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ZC3H14Q6PJT7 736 aaKnown RBP10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ENPP7Q6UWV6 458 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF619Q8N2I2 560 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 NPWQ8N729 165 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 KIAA1143Q96AT1 154 aaPredicted RBP10.92□□□□□ -0.66
U2AF1-209ENST00000475639 HS6ST2Q96MM7 605 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 KIF25Q9UIL4 384 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 FBXO7Q9Y3I1 522 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PCDHGA6Q9Y5G7 932 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 A0A0A6YYH2 397 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 A0A1B0GV50 99 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 A6NJ64 397 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 TP53I11O14683 189 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 B4GALT2O60909 372 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 RETP07949 1114 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF33BQ06732 778 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 TMEM81Q6P7N7 255 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 LRFN4Q6PJG9 635 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 TEX261Q6UWH6 196 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PIM3Q86V86 326 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 OR2T11Q8NH01 316 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PPP1R35Q8TAP8 253 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 SECISBP2Q96T21 854 aaKnown RBP10.92□□□□□ -0.66
U2AF1-209ENST00000475639 BARHL1Q9BZE3 327 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 HHATLQ9HCP6 504 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 GALPQ9UBC7 116 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ATG4BQ9Y4P1 393 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PCDHGA2Q9Y5H1 932 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 U3KQ87 197 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 SMIM35A0A1B0GVV1 85 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 SLC35F4A4IF30 521 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 SULT1B1O43704 296 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PTHP01270 115 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 SERPINA7P05543 415 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 FHP07954 510 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 OR4Q2P0C623 313 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 BDKRB2P30411 391 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PITPNBP48739 271 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 POU3F4P49335 361 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 CAV2P51636 162 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 CLCNKAP51800 687 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 GPR19Q15760 415 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 SLC14A2Q15849 920 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 AANATQ16613 207 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 GLCCI1Q86VQ1 547 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 MS4A15Q8N5U1 240 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 PGAM5Q96HS1 289 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ACBD6Q9BR61 282 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 RLIMQ9NVW2 624 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 FNIP2Q9P278 1114 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 KLHL13Q9P2N7 655 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 DHDHQ9UQ10 334 aa10.92□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF705GA8MUZ8 300 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FAM72CH0Y354 149 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PCDH17O14917 1159 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 RAB3BP20337 219 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 DGKEP52429 567 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 RAB11BQ15907 218 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SGCAQ16586 387 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF674Q2M3X9 581 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 MPP7Q5T2T1 576 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FAM72AQ5TYM5 149 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FAM72DQ6L9T8 149 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 CEACAM19Q7Z692 300 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 LRRTM4Q86VH4 590 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FAM72BQ86X60 149 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 NPAS3Q8IXF0 933 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF680Q8NEM1 530 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PCNPQ8WW12 178 aaKnown RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 TFGQ92734 400 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 HMCESQ96FZ2 354 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PPIL3Q9H2H8 161 aaKnown RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SPNS1Q9H2V7 528 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF334Q9HCZ1 680 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 TMEM45AQ9NWC5 275 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SDHAF2Q9NX18 166 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ZFP37Q9Y6Q3 630 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 NDUFS4O43181 175 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 CDKN2DP55273 166 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FOXK1P85037 733 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SERINC3Q13530 473 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FGFBP1Q14512 234 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 HOXB13Q92826 284 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 BSCL2Q96G97 398 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 HSH2DQ96JZ2 352 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 MRGPRX2Q96LB1 330 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms