RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 DNAJB9Q9UBS3 223 aa6.52□□□□□ -1.37
SHQ1-207ENST00000475558 PLEKHB1Q9UF11 243 aaPredicted RBP6.52□□□□□ -1.37
SHQ1-207ENST00000475558 AURKCQ9UQB9 309 aa6.52□□□□□ -1.37
SHQ1-207ENST00000475558 SLC9A8Q9Y2E8 581 aa6.52□□□□□ -1.37
SHQ1-207ENST00000475558 PCM1Q15154 2024 aa6.52□□□□□ -1.37
SHQ1-207ENST00000475558 NBPF19A0A087WUL8 3843 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 LOC102723996A0A087X1L8 192 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 C2orf92A0A1B0GVN3 265 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 HTR3EA5X5Y0 456 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 IDSB3KWA1 339 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 H3BNH8 94 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 TO15178 435 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CLOCKO15516 846 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 HS6ST1O60243 411 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 ZFAND5O76080 213 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 MED26O95402 600 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 SERPINA1P01009 418 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 DBIP07108 87 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CTSBP07858 339 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 THBS1P07996 1170 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PRKAR1AP10644 381 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 EFNA1P20827 205 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 S1PR1P21453 382 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PRKAR1BP31321 381 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 GABRA3P34903 492 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 TRHRP34981 398 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 MSX2P35548 267 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 KRT20P35900 424 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 VHLP40337 213 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 MAP3K8P41279 467 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 HSPA13P48723 471 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 MAN2A2P49641 1150 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CLK3P49761 638 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 NRG3P56975 720 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PCBP3P57721 371 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 RPP38P78345 283 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 BTG2P78543 158 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CDC20Q12834 499 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 GAB1Q13480 694 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 ERV3-1Q14264 604 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 RCN1Q15293 331 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 DECR1Q16698 335 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 DEFB109BQ30KR1 87 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CRTC2Q53ET0 693 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 GPAT3Q53EU6 434 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 IFI44LQ53G44 452 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 EIPR1Q53HC9 387 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CYBRD1Q53TN4 286 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 VWA2Q5GFL6 755 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 EXOSC6Q5RKV6 272 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 C1orf189Q5VU69 101 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CYP2R1Q6VVX0 501 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 RNF111Q6ZNA4 994 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 CPEB2Q7Z5Q1 589 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF440Q8IYI8 595 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 NLGN4XQ8N0W4 816 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 TAGAPQ8N103 731 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 SVOPLQ8N434 492 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 HORMAD2Q8N7B1 307 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 COX18Q8N8Q8 333 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 TEX19Q8NA77 164 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF527Q8NB42 609 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 FAM156AQ8NDB6 213 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 NLGN4YQ8NFZ3 816 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 OR7G2Q8NG99 324 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 OR52R1Q8NGF1 315 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 OR2Y1Q8NGV0 311 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 OR5AK3PQ8NH89 298 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 NUBPLQ8TB37 319 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 M1APQ8TC57 530 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 FAM110BQ8TC76 370 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PNPT1Q8TCS8 783 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PTPMT1Q8WUK0 201 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 GEMIN6Q8WXD5 167 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 SLC9A6Q92581 669 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 KAT2AQ92830 837 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 UCN3Q969E3 161 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 SDCCAG3Q96C92 435 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 GIMAP5Q96F15 307 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 SDF2Q99470 211 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 TREX2Q9BQ50 279 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 C9orf16Q9BUW7 83 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PINK1Q9BXM7 581 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 SPRY4Q9C004 299 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 VN1R1Q9GZP7 353 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PIF1Q9H611 641 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 NECTIN3Q9NQS3 549 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 PNO1Q9NRX1 252 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 SEC14L3Q9UDX4 400 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 C3orf18Q9UK00 162 aa6.51□□□□□ -1.37
SHQ1-207ENST00000475558 FARSAQ9Y285 508 aaKnown RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 GPR55Q9Y2T6 319 aaPredicted RBP6.51□□□□□ -1.37
SHQ1-207ENST00000475558 ESPL1Q14674 2120 aa6.5□□□□□ -1.37
SHQ1-207ENST00000475558 LOC101059948A0A1B0GTJ6 334 aa6.5□□□□□ -1.37
SHQ1-207ENST00000475558 A0A1W2PQ72 361 aa6.5□□□□□ -1.37
SHQ1-207ENST00000475558 TCRBV5S2A0A599 114 aa6.5□□□□□ -1.37
SHQ1-207ENST00000475558 FRG2CA6NGY1 282 aa6.5□□□□□ -1.37
SHQ1-207ENST00000475558 A8MVJ9 347 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms