RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 NLGN3Q9NZ94 848 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CGNQ9P2M7 1197 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 SNX6Q9UNH7 406 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 PROCRQ9UNN8 238 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CHMP2BQ9UQN3 213 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 DLGAP4Q9Y2H0 992 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TMED7Q9Y3B3 224 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 IGHV4OR15-8A0A075B7B6 117 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 LOC101059948A0A1B0GTJ6 334 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 A0A1W2PPI3 338 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 A0A1W2PPK0 400 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 TMEM129A0AVI4 362 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 PLSCR5A0PG75 271 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 A8MVM7 634 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 C10orf142B7Z368 130 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 C16orf97H3BN30 126 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 K7EPI3 171 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 E2F3O00716 465 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 OGTO15294 1046 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ACSL4O60488 711 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 RAD1O60671 282 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 MAGEC1O60732 1142 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CTSVO60911 334 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CLN5O75503 358 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 WISP2O76076 250 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SEMA4FO95754 770 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 LYNP07948 512 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SKILP12757 684 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 F3P13726 295 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ATF6P18850 670 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 MSH3P20585 1137 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CTNNA2P26232 953 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 RPA1P27694 616 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 PKLRP30613 574 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 NKX2-1P43699 371 aaPredicted RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 GLIPR1P48060 266 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 NUMBP49757 651 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 DNA2P51530 1060 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CNN1P51911 297 aaKnown RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 FUT6P51993 359 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 GEMP55040 296 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ADARP55265 1226 aaKnown RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 MAZP56270 477 aaKnown RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 LINC00205P59089 165 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 RPP38P78345 283 aaKnown RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 CCZ1BP86790 482 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CCZ1P86791 482 aaPredicted RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 CDR2Q01850 454 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 LGALS3BPQ08380 585 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 OVGP1Q12889 678 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ZBTB17Q13105 803 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 TRAF3Q13114 568 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 NME3Q13232 169 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SCGB2A2Q13296 93 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SQLEQ14534 574 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 NFATC4Q14934 902 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 KIR2DS3Q14952 304 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 UPP1Q16831 310 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 IZUMO4Q1ZYL8 232 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ANKDD1AQ495B1 522 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 RAB6CQ53S08 254 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CMPK2Q5EBM0 449 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CCNYL2Q5T2Q4 361 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 LYPLAL1Q5VWZ2 237 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CES4AQ5XG92 561 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CENPPQ6IPU0 288 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SLC27A4Q6P1M0 643 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 NEK5Q6P3R8 708 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 LINGO4Q6UY18 593 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 C12orf54Q6X4T0 127 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 RFPL4BQ6ZWI9 263 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 GPR141Q7Z602 305 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 TMEM135Q86UB9 458 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SATL1Q86VE3 508 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CDR2LQ86X02 465 aaPredicted RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 LAX1Q8IWV1 398 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ELMOD2Q8IZ81 293 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 IQCF1Q8N6M8 205 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 RBMXL3Q8N7X1 1067 aaKnown RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 TCEANCQ8N8B7 351 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ZNF441Q8N8Z8 693 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ZNF383Q8NA42 475 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 RNF149Q8NC42 400 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 STKLD1Q8NE28 680 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SLC24A4Q8NFF2 622 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 OR2T12Q8NG77 320 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 OR10Q1Q8NGQ4 319 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 LRRC8CQ8TDW0 803 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 STARD8Q92502 1023 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 HSD17B8Q92506 261 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ARHGAP45Q92619 1136 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 N4BP2L2Q92802 583 aaPredicted RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 NEUROG1Q92886 237 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 KIAA1143Q96AT1 154 aaPredicted RBP2.08□□□□□ -2.08
CALD1-216ENST00000473714 CCDC51Q96ER9 411 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 CXorf58Q96LI9 332 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 SAMD8Q96LT4 415 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 ZNF354BQ96LW1 612 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 DUX5Q96PT3 197 aa2.08□□□□□ -2.08
CALD1-216ENST00000473714 NDNQ99608 321 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms