RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TRIM45Q9H8W5 580 aaPredicted RBP9.94□□□□□ -0.82
SP140-208ENST00000473711 NTN4Q9HB63 628 aa9.94□□□□□ -0.82
SP140-208ENST00000473711 CACYBPQ9HB71 228 aaKnown RBP9.94□□□□□ -0.82
SP140-208ENST00000473711 DNAJB9Q9UBS3 223 aa9.94□□□□□ -0.82
SP140-208ENST00000473711 CBLCQ9ULV8 474 aa9.94□□□□□ -0.82
SP140-208ENST00000473711 ZNF232Q9UNY5 417 aa9.94□□□□□ -0.82
SP140-208ENST00000473711 FARSAQ9Y285 508 aaKnown RBP9.94□□□□□ -0.82
SP140-208ENST00000473711 AK5Q9Y6K8 562 aa9.94□□□□□ -0.82
SP140-208ENST00000473711 DSPPQ9NZW4 1301 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 CDC14CA4D256 554 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 OR6C76A6NM76 312 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 RAD1O60671 282 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 EPPINO95925 133 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 CAPNS1P04632 268 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 RAB40ALP0C0E4 278 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 DRD5P21918 477 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 PIGAP37287 484 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 RNF144AP50876 292 aaPredicted RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 NR0B1P51843 470 aaKnown RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 RPS18P62269 152 aaKnown RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 GABREP78334 506 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 PPP1R8Q12972 351 aaKnown RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 MAPK14Q16539 360 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 IQCCQ4KMZ1 466 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 OR2T5Q6IEZ7 315 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 COMTD1Q86VU5 262 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 CARM1Q86X55 608 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 RBM45Q8IUH3 476 aaKnown RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 PEX5LQ8IYB4 626 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 NLGN4XQ8N0W4 816 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 GALNT4Q8N4A0 578 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 NLGN4YQ8NFZ3 816 aaPredicted RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 OR4D11Q8NGI4 311 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 OR2T29Q8NH02 315 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 TMBIM1Q969X1 311 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 EME1Q96AY2 570 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 ZNF354BQ96LW1 612 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 BTBD9Q96Q07 612 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 LMF1Q96S06 567 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 CIB1Q99828 191 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 WFDC6Q9BQY6 131 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 PINK1Q9BXM7 581 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 AMBRA1Q9C0C7 1298 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 WWTR1Q9GZV5 400 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 VCX3BQ9H321 246 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 POLR1BQ9H9Y6 1135 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 LIN28AQ9H9Z2 209 aaKnown RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 POLE3Q9NRF9 147 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 NDUFAF4Q9P032 175 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 ZNF223Q9UK11 482 aaPredicted RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 SLC13A4Q9UKG4 626 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 ZNF443Q9Y2A4 671 aaPredicted RBP9.93□□□□□ -0.82
SP140-208ENST00000473711 IFT52Q9Y366 437 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 DTNAQ9Y4J8 743 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 DMDP11532 3685 aa9.93□□□□□ -0.82
SP140-208ENST00000473711 CCDC88CQ9P219 2028 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 LOC102723996A0A087X1L8 192 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 TRBV11-1A0A0K0K1C0 115 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 CENPVL1A0A0U1RR11 272 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 FRG2CA6NGY1 282 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 AGAP5A6NIR3 686 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 CLDN24A6NM45 220 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 J3KTA2 159 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 M0R3H8 397 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 PDLIM1O00151 329 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 PEX12O00623 359 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 PEX1O43933 1283 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 REM1O75628 298 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 UGT2B17O75795 530 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 LGI1O95970 557 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 IGHEP01854 428 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 IFNW1P05000 195 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 DBIP07108 87 aaKnown RBP9.92□□□□□ -0.82
SP140-208ENST00000473711 IL7RP16871 459 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 ITGA2P17301 1181 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 RBMS1P29558 406 aaKnown RBP9.92□□□□□ -0.82
SP140-208ENST00000473711 DLSTP36957 453 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 IST1P53990 364 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 SLC26A5P58743 744 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 DCAF7P61962 342 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 RPS15P62841 145 aaKnown RBP9.92□□□□□ -0.82
SP140-208ENST00000473711 RNF4P78317 190 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 FOXD4Q12950 439 aaPredicted RBP9.92□□□□□ -0.82
SP140-208ENST00000473711 DNASE1L3Q13609 305 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 LARS2Q15031 903 aaKnown RBP9.92□□□□□ -0.82
SP140-208ENST00000473711 PCOLCEQ15113 449 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 EBPQ15125 230 aaKnown RBP9.92□□□□□ -0.82
SP140-208ENST00000473711 DECR1Q16698 335 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 FLYWCH1Q4VC44 716 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 DHRS4L2Q6PKH6 230 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 HSDL2Q6YN16 418 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 ZNF836Q6ZNA1 936 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 ZBTB49Q6ZSB9 765 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 LACC1Q8IV20 430 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 KBTBD2Q8IY47 623 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 PRR22Q8IZ63 422 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 CLIP4Q8N3C7 705 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 APCDD1LQ8NCL9 501 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 CATSPER1Q8NEC5 780 aa9.92□□□□□ -0.82
SP140-208ENST00000473711 THAP3Q8WTV1 239 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms