RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
APTX-217ENST00000473221 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
APTX-217ENST00000473221 MKLN1Q9UL63 735 aa9.37□□□□□ -0.91
APTX-217ENST00000473221 PPIEQ9UNP9 301 aaKnown RBP9.37□□□□□ -0.91
APTX-217ENST00000473221 PCDHGA3Q9Y5H0 932 aa9.37□□□□□ -0.91
APTX-217ENST00000473221 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
APTX-217ENST00000473221 LYVE1Q9Y5Y7 322 aa9.37□□□□□ -0.91
APTX-217ENST00000473221 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
APTX-217ENST00000473221 SEC16AO15027 2179 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 CCDC187A0A096LP49 1063 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 GXYLT2A0PJZ3 443 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 C9J4A7 227 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 H0YAE9 185 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TNFRSF11BO00300 401 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 DLGAP1O14490 977 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TO15178 435 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 CSO75390 466 aaKnown RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 DIRAS1O95057 198 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 EPPINO95925 133 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 IL7RP16871 459 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 ZNF28P17035 718 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TNFRSF1BP20333 461 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 SLC5A2P31639 672 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 IFNA8P32881 189 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 GPR143P51810 404 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 EFNA3P52797 238 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 LIMK1P53667 647 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 IST1P53990 364 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 EEF1A1P68104 462 aaKnown RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 MERTKQ12866 999 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TRIP6Q15654 476 aaKnown RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 GPR68Q15743 365 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.36□□□□□ -0.91
APTX-217ENST00000473221 LIN52Q52LA3 116 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 COLEC12Q5KU26 742 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 OTUD3Q5T2D3 398 aaPredicted RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 STPG1Q5TH74 334 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 FIGNL1Q6PIW4 674 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TBPL2Q6SJ96 375 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 ANKRD37Q7Z713 158 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TMEM179BQ7Z7N9 219 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 VRK2Q86Y07 508 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 LINC00471Q8N535 108 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 PIK3C3Q8NEB9 887 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 C17orf47Q8NEP4 570 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TFAP2CQ92754 450 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 ADIPOR1Q96A54 375 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 ZG16BQ96DA0 208 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 HSPBAP1Q96EW2 488 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 LCORQ96JN0 433 aaPredicted RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 DHRS1Q96LJ7 313 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 PSD2Q9BQI7 771 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 NUDT9Q9BW91 350 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 RSPO3Q9BXY4 272 aaPredicted RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 ITPAQ9BY32 194 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 FAM117AQ9C073 453 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 SEMA4CQ9C0C4 833 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 OR8D2Q9GZM6 311 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 HOXD1Q9GZZ0 328 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 ACER3Q9NUN7 267 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 TOR4AQ9NXH8 423 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 VNN3Q9NY84 501 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 C3orf18Q9UK00 162 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 CBLCQ9ULV8 474 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 ZNF443Q9Y2A4 671 aaPredicted RBP9.36□□□□□ -0.91
APTX-217ENST00000473221 ORC6Q9Y5N6 252 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 AP4B1Q9Y6B7 739 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 U3KQV3 271 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 NINQ8N4C6 2090 aa9.36□□□□□ -0.91
APTX-217ENST00000473221 C2orf92A0A1B0GVN3 265 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 ARRDC5A6NEK1 342 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 FRG2CA6NGY1 282 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 SAGE2PA6NJ88 616 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 A8MUA0 341 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 AP3D1O14617 1153 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 SLC30A4O14863 429 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 UGT2B17O75795 530 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 DKK1O94907 266 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 GADD45GO95257 159 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 IGHEP01854 428 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 JMJD7P0C870 316 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 THRBP10828 461 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 ANXA8P13928 327 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 NID1P14543 1247 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 CDH2P19022 906 aaPredicted RBP9.35□□□□□ -0.91
APTX-217ENST00000473221 LIMS1P48059 325 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 ATP12AP54707 1039 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 SPIBQ01892 262 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 ZNF141Q15928 474 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 DECR1Q16698 335 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 MICAQ29983 383 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 SLC36A3Q495N2 470 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 FLYWCH1Q4VC44 716 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 SWT1Q5T5J6 900 aaKnown RBP9.35□□□□□ -0.91
APTX-217ENST00000473221 CCNJQ5T5M9 372 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 TMEM164Q5U3C3 297 aa9.35□□□□□ -0.91
APTX-217ENST00000473221 TTC23Q5W5X9 447 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms