RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CSTAP01040 98 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 TSHBP01222 138 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CSF2P04141 144 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 P04436 131 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ANXA5P08758 320 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CD48P09326 243 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 IGHV4-30-4P0DP06 118 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ZNF44P15621 663 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 FBLP22087 321 aaKnown RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 NF2P35240 595 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SLC26A2P50443 739 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PPT1P50897 306 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PLA2G16P53816 162 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 HAND2P61296 217 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SRYQ05066 204 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 Q0VFX4 171 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 FOXE3Q13461 319 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 KLF9Q13886 244 aaPredicted RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 LRRC23Q53EV4 343 aaPredicted RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 UNC50Q53HI1 259 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 BEX5Q5H9J7 111 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 BEND6Q5SZJ8 279 aaPredicted RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 C6orf183Q5T699 404 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SLX4IPQ5VYV7 408 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 NCAPH2Q6IBW4 605 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CCDC80Q76M96 950 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 RUFY3Q7L099 469 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 BIVMQ86UB2 503 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 Q8N1X5 172 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 TMEM163Q8TC26 289 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SCARB1Q8WTV0 552 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 OTULINQ96BN8 352 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PPP1R16AQ96I34 528 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ANKRD27Q96NW4 1050 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 OR1F2PQ96R84 312 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 TSSK1BQ9BXA7 367 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ROGDIQ9GZN7 287 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SDCBP2Q9H190 292 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SLC25A51Q9H1U9 297 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GAREM1Q9H706 876 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 UGT1A10Q9HAW8 530 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ZNF160Q9HCG1 818 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 IL1RAPQ9NPH3 570 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 FGF21Q9NSA1 209 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 INTS9Q9NV88 658 aaKnown RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 SIGLEC8Q9NYZ4 499 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 IL36GQ9NZH8 169 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ERVK-18Q9QC07 812 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ZNF639Q9UID6 485 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PDE10AQ9Y233 779 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SCN7AQ01118 1682 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ANKRD31Q8N7Z5 1873 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 TTC26A0AVF1 554 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 LILRA5A6NI73 299 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 GABRR3A8MPY1 467 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 C2CD4DB7Z1M9 353 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 E5RJQ4 531 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 XPNPEP2O43895 674 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 PMS2P2O95744 297 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 CLDN1O95832 211 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 APOHP02749 345 aaPredicted RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 SFTPBP07988 381 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ANPEPP15144 967 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 HOXA5P20719 270 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 CPN2P22792 545 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 CAPGP40121 348 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 CD151P48509 253 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ETV1P50549 477 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 NOVA1P51513 510 aaKnown RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 NME3Q13232 169 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ENPP2Q13822 863 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 PIP5KL1Q5T9C9 394 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 LCN1P1Q5VSP4 162 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ZNF626Q68DY1 528 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 HACD2Q6Y1H2 254 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 USP50Q70EL3 339 aaPredicted RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 PTAR1Q7Z6K3 402 aaPredicted RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 GPBP1Q86WP2 473 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 PLD3Q8IV08 490 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 CCDC60Q8IWA6 550 aaPredicted RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 CNBD1Q8NA66 436 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 OR2T33Q8NG76 320 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 LILRB4Q8NHJ6 448 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 KCNG3Q8TAE7 436 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 KIFAP3Q92845 792 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 LRRC39Q96DD0 335 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 NACA2Q9H009 215 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 PRO3102Q9H379 93 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 LRRN3Q9H3W5 708 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ATP13A3Q9H7F0 1226 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 COG4Q9H9E3 785 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 INPP5EQ9NRR6 644 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 UFSP2Q9NUQ7 469 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 POLKQ9UBT6 870 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 SLC12A6Q9UHW9 1150 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ICAM5Q9UMF0 924 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 OR10H1Q9Y4A9 318 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 TESMINQ9Y4I5 508 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 FKBP7Q9Y680 259 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 EDC4Q6P2E9 1401 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms