RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GABRA3P34903 492 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 DIO3P55073 304 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 SLC18A2Q05940 514 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 GANABQ14697 944 aaKnown RBP20.37■□□□□ 0.85
C9orf3-213ENST00000471978 ANKRD26P1Q6NSI1 321 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 MARCH3Q86UD3 253 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 MED12LQ86YW9 2145 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 MEIOBQ8N635 442 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 EQTNQ9NQ60 294 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 PACSIN3Q9UKS6 424 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 ZNF469Q96JG9 3925 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-213ENST00000471978 A0A1W2PNV4 684 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 SLC22A20A6NK97 555 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 TTC36A6NLP5 189 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 KCNH1O95259 989 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 PRPS2P11908 318 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 CD99P14209 185 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 GPC1P35052 558 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 PCLAFQ15004 111 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 Q6ZSR9 355 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 OR5M1Q8NGP8 315 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 OR2T11Q8NH01 316 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 CIDECQ96AQ7 238 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-213ENST00000471978 TRIM44Q96DX7 344 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-213ENST00000471978 DACH2Q96NX9 599 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 CCT7Q99832 543 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 TMUB1Q9BVT8 246 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 GATA5Q9BWX5 397 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-213ENST00000471978 ZNF337Q9Y3M9 751 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 ABCA4P78363 2273 aa20.36■□□□□ 0.85
C9orf3-213ENST00000471978 VPS13CQ709C8 3753 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 NIPBLQ6KC79 2804 aaeCLIP20.35■□□□□ 0.85
C9orf3-213ENST00000471978 GXYLT2A0PJZ3 443 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 SH3D21A4FU49 640 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 A8MXE2 369 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 AKAP10O43572 662 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 TRIM13O60858 407 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 GOSR1O95249 250 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 UTS2O95399 124 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 CHEK2O96017 543 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 LINC00032P0C843 101 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 NEFHP12036 1026 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 EEFSECP57772 596 aaKnown RBP20.35■□□□□ 0.85
C9orf3-213ENST00000471978 OR2A2Q6IF42 318 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 PAMR1Q6UXH9 720 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 TGIF2LYQ8IUE0 185 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 GPR151Q8TDV0 419 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 PIK3R3Q92569 461 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 PPCDCQ96CD2 204 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 C1GALT1C1Q96EU7 318 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 ZNF764Q96H86 408 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-213ENST00000471978 FCRL1Q96LA6 429 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 TSSK3Q96PN8 268 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 TRMOQ9BU70 441 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 TBL1XR1Q9BZK7 514 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 TUBB1Q9H4B7 451 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 REEP4Q9H6H4 257 aa20.35■□□□□ 0.85
C9orf3-213ENST00000471978 OR2M5A3KFT3 312 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 H0YC42 278 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 LINC01387J3KSC0 135 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 SEC14L5O43304 696 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 IGKV1D-16P01601 117 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 CRHP06850 196 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 SDC1P18827 310 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 CPOXP36551 454 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 SUCLG1P53597 346 aaKnown RBP20.34■□□□□ 0.85
C9orf3-213ENST00000471978 PRKAG1P54619 331 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 TPD52P55327 224 aaPredicted RBP20.34■□□□□ 0.85
C9orf3-213ENST00000471978 CLDN15P56746 228 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 RPL38P63173 70 aaKnown RBP20.34■□□□□ 0.85
C9orf3-213ENST00000471978 C17orf67Q0P5P2 114 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 VPS26BQ4G0F5 336 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 RFTN2Q52LD8 501 aaPredicted RBP20.34■□□□□ 0.85
C9orf3-213ENST00000471978 ZNF385BQ569K4 471 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 KANK2Q63ZY3 851 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 RNF165Q6ZSG1 346 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 CAMKMTQ7Z624 323 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 CNEP1R1Q8N9A8 125 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 CEP70Q8NHQ1 597 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 ZFP28Q8NHY6 868 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 ZBED6CLQ96FA7 236 aaPredicted RBP20.34■□□□□ 0.85
C9orf3-213ENST00000471978 ALPK1Q96QP1 1244 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 PIGQQ9BRB3 760 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 IQCGQ9H095 443 aaKnown RBP20.34■□□□□ 0.85
C9orf3-213ENST00000471978 SH3BP4Q9P0V3 963 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 BAIAP2L1Q9UHR4 511 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 DNAJC15Q9Y5T4 150 aa20.34■□□□□ 0.85
C9orf3-213ENST00000471978 TLDC2A0PJX2 215 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 H3BML4 177 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 MSTNO14793 375 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 TBX19O60806 448 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 SMNDC1O75940 238 aaKnown RBP eCLIP20.33■□□□□ 0.85
C9orf3-213ENST00000471978 ANGPTL1O95841 491 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 RAF1P04049 648 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 MANFP55145 182 aaKnown RBP20.33■□□□□ 0.85
C9orf3-213ENST00000471978 PPP2R2AP63151 447 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 PRR5P85299 388 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 POU4F3Q15319 338 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 GRAMD1BQ3KR37 738 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 GLYR1Q49A26 553 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms