RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ZNF446Q9NWS9 450 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 QPCTLQ9NXS2 382 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 TAS2R16Q9NYV7 291 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 FBXW11Q9UKB1 542 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PCDHGA1Q9Y5H4 931 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PRR36Q9H6K5 1346 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 RAB19A4D1S5 217 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 A8MT66 165 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 K7EQM0 130 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SURF4O15260 269 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PTBP3O95758 552 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GNB1P62873 340 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 TLE4Q04727 773 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 MAP4K2Q12851 820 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 AADACL3Q5VUY0 350 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 B3GLCTQ6Y288 498 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 RPS27LQ71UM5 84 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 STEAP2Q8NFT2 490 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PPTC7Q8NI37 304 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GIMAP1Q8WWP7 306 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 BOCQ9BWV1 1114 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 IL17RBQ9NRM6 502 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 TAS2R8Q9NYW2 309 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SLC6A5Q9Y345 797 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 TCRBV7S2A1N4TA0A589 114 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GPR137BO60478 399 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 KCNK5O95279 499 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 KLF8O95600 359 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PPP1R3DO95685 299 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 RAB3DO95716 219 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 HLA-DQB2P05538 268 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 JUPP14923 745 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 OMGP23515 440 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 TACR3P29371 465 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 L1CAMP32004 1257 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CDKN2BP42772 138 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 FLI1Q01543 452 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GPR50Q13585 617 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GPR33Q49SQ1 333 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SPANXN4Q5MJ08 99 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 TREML2Q5T2D2 321 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 NT5DC1Q5TFE4 455 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 RPL7L1Q6DKI1 246 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 NXPE4Q6UWF7 544 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 DEFB132Q7Z7B7 95 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CREB3L4Q8TEY5 395 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 DAZLQ92904 295 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ACDQ96AP0 544 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 HYLS1Q96M11 299 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ZFYVE21Q9BQ24 234 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 BCO2Q9BYV7 579 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SLC25A18Q9H1K4 315 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SACM1LQ9NTJ5 587 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GALPQ9UBC7 116 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CAMK2AQ9UQM7 478 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 FEZF1A0PJY2 475 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 UPK3BL1B0FP48 263 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 UPK3BL2E5RIL1 263 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 TOR1AO14656 332 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 FBXO24O75426 580 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ABOP16442 354 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 HNF1AP20823 631 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 HLA-FP30511 346 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 IL2RGP31785 369 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 GKP32189 559 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RFTN1Q14699 578 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 TESK1Q15569 626 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 PLBD1Q6P4A8 553 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MAMDC4Q6UXC1 1216 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RNF175Q8N4F7 328 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ARSGQ96EG1 525 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SFXN2Q96NB2 322 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RBM14Q96PK6 669 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 NICN1Q9BSH3 213 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 PITHD1Q9GZP4 211 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 DUSP22Q9NRW4 184 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZDHHC2Q9UIJ5 367 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RGPD8O14715 1765 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ARPC1BO15143 372 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ADH1BP00325 375 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 HOXB5P09067 269 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 VIPR2P41587 438 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RPS24P62847 133 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RIPPLY1Q0D2K3 151 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 C1orf61Q13536 156 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OPCMLQ14982 345 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CNN3Q15417 329 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MSMO1Q15800 293 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RABL3Q5HYI8 236 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ETFRF1Q6IPR1 90 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 AGTRAPQ6RW13 159 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MAMDC2Q7Z304 686 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 LRRC57Q8N9N7 239 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR5L2Q8NGL0 311 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF596Q8TC21 504 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CPNE4Q96A23 557 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 LURAP1Q96LR2 239 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR52B2Q96RD2 323 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms