RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ZDHHC21Q8IVQ6 265 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 PYROXD2Q8N2H3 581 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 Q8N7P7 452 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 NFAM1Q8NET5 270 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 GIPC3Q8TF64 312 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 RAB3CQ96E17 227 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ZNF414Q96IQ9 312 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 C4orf36Q96KX1 117 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 B3GALT6Q96L58 329 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ZIM3Q96PE6 472 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 C19orf43Q9BQ61 176 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ERVK-6Q9BXR3 956 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 DEFB126Q9BYW3 111 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 DCTPP1Q9H773 170 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 KAT8Q9H7Z6 458 aaKnown RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 CALHM2Q9HA72 323 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 PALMDQ9NP74 551 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ABCB10Q9NRK6 738 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ZNF275Q9NSD4 429 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 GDAP2Q9NXN4 497 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 TUBGCP4Q9UGJ1 667 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 IKZF3Q9UKT9 509 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 KLF2Q9Y5W3 355 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ATAD2BQ9ULI0 1458 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 AFF2P51816 1311 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 CLRN2A0PK11 232 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 LRRC30A6NM36 301 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 H3BTX0 84 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 K7ERI5 159 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 XPO1O14980 1071 aaKnown RBP2.86□□□□□ -1.95
BRCA2-202ENST00000470094 ALOX15BO15296 676 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 TBX19O60806 448 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 CHRNA1P02708 482 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 IQCF3P0C7M6 154 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 PGAM2P15259 253 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 FASP25445 335 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 AXLP30530 894 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 OTX2P32243 289 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 MDH2P40926 338 aaKnown RBP2.86□□□□□ -1.95
BRCA2-202ENST00000470094 MAGEA9P43362 315 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 SLC25A1P53007 311 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 NAPAP54920 295 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 ACTR1AP61163 376 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 SRYQ05066 204 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 ZP4Q12836 540 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 IL24Q13007 206 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 CHIT1Q13231 466 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 GPM6BQ13491 265 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 EXOSC2Q13868 293 aaKnown RBP2.86□□□□□ -1.95
BRCA2-202ENST00000470094 TRIP10Q15642 601 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 MICAQ29983 383 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 SHROOM1Q2M3G4 852 aaPredicted RBP2.86□□□□□ -1.95
BRCA2-202ENST00000470094 ZNF311Q5JNZ3 666 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 TCHHL1Q5QJ38 904 aaPredicted RBP2.86□□□□□ -1.95
BRCA2-202ENST00000470094 ATAD3BQ5T9A4 648 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 NCR3LG1Q68D85 454 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 DMKNQ6E0U4 476 aaPredicted RBP2.86□□□□□ -1.95
BRCA2-202ENST00000470094 CBLN3Q6UW01 205 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 P4HA3Q7Z4N8 544 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 VASH2Q86V25 355 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 EFCAB13Q8IY85 973 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 ZNF525Q8N782 197 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 CRYGNQ8WXF5 182 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 SHC3Q92529 594 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 BIRC7Q96CA5 298 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 CYYR1Q96J86 154 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 TESK2Q96S53 571 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 TSPAN18Q96SJ8 248 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 CPXM1Q96SM3 734 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 TMEM117Q9H0C3 514 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 NRN1Q9NPD7 142 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 TIGARQ9NQ88 270 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 AGPAT5Q9NUQ2 364 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 IMPAD1Q9NX62 359 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 RAI14Q9P0K7 980 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 Q9UF83 564 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 FZR1Q9UM11 496 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 SNX6Q9UNH7 406 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 IKBKGQ9Y6K9 419 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 DDX49Q9Y6V7 483 aaKnown RBP2.86□□□□□ -1.95
BRCA2-202ENST00000470094 KDRP35968 1356 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 PARD3Q8TEW0 1356 aa2.86□□□□□ -1.95
BRCA2-202ENST00000470094 A0A0A6YYD4 124 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 KLF18A0A0U1RQI7 1052 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 A0A1W2PNU3 283 aaPredicted RBP2.85□□□□□ -1.95
BRCA2-202ENST00000470094 EFCAB7A8K855 629 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 H0YL77 283 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 H3BMH7 237 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 SDHDO14521 159 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 RIPK2O43353 540 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 TSC22D2O75157 780 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 TOXO94900 526 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 OPN1MWP04001 364 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 ANXA4P09525 319 aaPredicted RBP2.85□□□□□ -1.95
BRCA2-202ENST00000470094 SLC35G4P0C7Q5 338 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 OPN1MW2P0DN77 364 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 OPN1MW3P0DN78 364 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 CLUP10909 449 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 TSPAN8P19075 237 aa2.85□□□□□ -1.95
BRCA2-202ENST00000470094 GLRA2P23416 452 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms