RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PRRG2O14669 202 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 DNAJA2O60884 412 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 NPPAP01160 153 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 ANXA4P09525 319 aaPredicted RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 PRPH2P23942 346 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 DNASE1L1P49184 302 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 TMED10P49755 219 aaKnown RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 NR0B1P51843 470 aaKnown RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 CHN2P52757 468 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 NRG3P56975 720 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 UFM1P61960 85 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 EMX2Q04743 252 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF763Q0D2J5 394 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 FOXO1Q12778 655 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 ARHGAP11AQ6P4F7 1023 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 FAM111BQ6SJ93 734 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 EID3Q8N140 333 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 FAM109AQ8N4B1 249 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 EME1Q96AY2 570 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 C1orf50Q9BV19 199 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 EBPLQ9BY08 206 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 GIMAP4Q9NUV9 329 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 CACNA1CQ13936 2221 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 C15orf38-AP3S2A0A0A6YYH1 394 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 A0A1B0GTH9 108 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 G3V3Y1 287 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 SLC6A2P23975 617 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 PTGS2P35354 604 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 SOX18P35713 384 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 CAPRIN1Q14444 709 aaKnown RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 TBCELQ5QJ74 424 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 ARPINQ7Z6K5 226 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 DOLPP1Q86YN1 238 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF808Q8N4W9 903 aaPredicted RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 OR10G3Q8NGC4 313 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 PHF10Q8WUB8 498 aaKnown RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 ITLN2Q8WWU7 325 aaPredicted RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 PPP3R2Q96LZ3 170 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 SECISBP2Q96T21 854 aaKnown RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 CMTM6Q9NX76 183 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
COL27A1-203ENST00000468565 ENTPD4Q9Y227 616 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 MEMO1Q9Y316 297 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 CCL27Q9Y4X3 112 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 NPFFR2Q9Y5X5 522 aa13.29□□□□□ -0.28
COL27A1-203ENST00000468565 FAM166BA8MTA8 275 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 SLC28A1O00337 649 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 TP53I11O14683 189 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 CBX7O95931 251 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 IGHG3P01860 377 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 DDCP20711 480 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 PIGAP37287 484 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 EEFSECP57772 596 aaKnown RBP13.28□□□□□ -0.28
COL27A1-203ENST00000468565 DUSP8Q13202 625 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 SMU1Q2TAY7 513 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF628Q5EBL2 1059 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 HIST2H2BCQ6DN03 193 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 LCN8Q6JVE9 175 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 Q6ZSR9 355 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL27A1-203ENST00000468565 LRTOMTQ8WZ04 291 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 EXOSC8Q96B26 276 aaKnown RBP13.28□□□□□ -0.28
COL27A1-203ENST00000468565 SLCO4A1Q96BD0 722 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 POM121Q96HA1 1249 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 MYNNQ9NPC7 610 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 SLC35C2Q9NQQ7 365 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 ARMC1Q9NVT9 282 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 ACTR3BQ9P1U1 418 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 PRODH2Q9UF12 536 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 BOKQ9UMX3 212 aaPredicted RBP13.28□□□□□ -0.28
COL27A1-203ENST00000468565 DTX4Q9Y2E6 619 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 SNX13Q9Y5W8 968 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 AP4B1Q9Y6B7 739 aa13.28□□□□□ -0.28
COL27A1-203ENST00000468565 E9PLN8 166 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 RGS14O43566 566 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 AHCYL1O43865 530 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 NAGAP17050 411 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 AGAP20933 346 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 ATP6V1B2P21281 511 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.28
COL27A1-203ENST00000468565 DCAF7P61962 342 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 RPP38P78345 283 aaKnown RBP13.27□□□□□ -0.28
COL27A1-203ENST00000468565 ADORA2A-AS1P86434 159 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 MAD2L1Q13257 205 aaPredicted RBP13.27□□□□□ -0.28
COL27A1-203ENST00000468565 EXOSC7Q15024 291 aaKnown RBP13.27□□□□□ -0.28
COL27A1-203ENST00000468565 LTB4RQ15722 352 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 TRMT12Q53H54 448 aaKnown RBP13.27□□□□□ -0.28
COL27A1-203ENST00000468565 PRAMEF20Q5VT98 475 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 FAM180BQ6P0A1 224 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 UGT2A3Q6UWM9 527 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 IKBIPQ70UQ0 350 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 MRGPRGQ86SM5 289 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 CCDC116Q8IYX3 515 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 GALNT4Q8N4A0 578 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 VPS33AQ96AX1 596 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 HSPBAP1Q96EW2 488 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms