RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 G3V2L1 256 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 GMFGO60234 142 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 SLITRK5O94991 958 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 PSMG1O95456 288 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 FAM153BP0C7A2 387 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 CD79BP40259 229 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 KIR2DL2P43627 348 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-207ENST00000467819 CLDN20P56880 219 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 EEFSECP57772 596 aaKnown RBP18.99■□□□□ 0.63
COL9A3-207ENST00000467819 NKX6-1P78426 367 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-207ENST00000467819 SLC29A2Q14542 456 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 FAM153CQ494X1 144 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 ZNF474Q6S9Z5 364 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-207ENST00000467819 ZYG11AQ6WRX3 759 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 Q71RC1 249 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-207ENST00000467819 KRTAP1-3Q8IUG1 177 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 OR2L13Q8N349 312 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL9A3-207ENST00000467819 DUSP19Q8WTR2 217 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 MZB1Q8WU39 189 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 ELP4Q96EB1 424 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 CCDC126Q96EE4 140 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 ZNF845Q96IR2 970 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-207ENST00000467819 EQTNQ9NQ60 294 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 DCDC2Q9UHG0 476 aa18.99■□□□□ 0.63
COL9A3-207ENST00000467819 A0A1W2PPM1 405 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 SIAH2O43255 324 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 CTIFO43310 598 aaKnown RBP18.98■□□□□ 0.63
COL9A3-207ENST00000467819 IL33O95760 270 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 POU2F1P14859 743 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 CLK3P49761 638 aaKnown RBP18.98■□□□□ 0.63
COL9A3-207ENST00000467819 NOXRED1Q6NXP6 359 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 FRMD7Q6ZUT3 714 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 BIVMQ86UB2 503 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 CXorf67Q86X51 503 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-207ENST00000467819 IFT20Q8IY31 132 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 FNDC9Q8TBE3 224 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 C1GALT1C1Q96EU7 318 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 C18orf12Q96KH6 178 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 PIGQQ9BRB3 760 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 MED18Q9BUE0 208 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 TAS2R7Q9NYW3 318 aa18.98■□□□□ 0.63
COL9A3-207ENST00000467819 MRTO4Q9UKD2 239 aaKnown RBP18.98■□□□□ 0.63
COL9A3-207ENST00000467819 GXYLT2A0PJZ3 443 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 SHISA8B8ZZ34 492 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 GLRA3O75311 464 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 TNFRSF21O75509 655 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 UTS2O95399 124 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 ADSLP30566 484 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-207ENST00000467819 CCKARP32238 428 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 GABRA3P34903 492 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 KCNJ5P48544 419 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 PSMD4P55036 377 aaKnown RBP18.97■□□□□ 0.63
COL9A3-207ENST00000467819 HSPB3Q12988 150 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 PON3Q15166 354 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 CFAP157Q5JU67 520 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 ZNF550Q7Z398 422 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 TRIM46Q7Z4K8 759 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 FAM76AQ8TAV0 307 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 PIK3IP1Q96FE7 263 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 EGLN2Q96KS0 407 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 LMF2Q9BU23 707 aaKnown RBP18.97■□□□□ 0.63
COL9A3-207ENST00000467819 TBL1XR1Q9BZK7 514 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 TNFRSF12AQ9NP84 129 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 RRAGDQ9NQL2 400 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-207ENST00000467819 ZNF226Q9NYT6 803 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 ROS1P08922 2347 aa18.97■□□□□ 0.63
COL9A3-207ENST00000467819 DEFB108AA8MXU0 73 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 RSL1D1O76021 490 aaKnown RBP18.96■□□□□ 0.63
COL9A3-207ENST00000467819 PROCP04070 461 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 LTBQ06643 244 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 SHEQ5VZ18 495 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 PPP4R4Q6NUP7 873 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 IKBIPQ70UQ0 350 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 ZNF551Q7Z340 670 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-207ENST00000467819 PIK3R3Q92569 461 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 GFM2Q969S9 779 aaKnown RBP18.96■□□□□ 0.63
COL9A3-207ENST00000467819 ZC3HAV1LQ96H79 300 aaKnown RBP18.96■□□□□ 0.63
COL9A3-207ENST00000467819 SLC39A3Q9BRY0 314 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 RNF122Q9H9V4 155 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 UBTD1Q9HAC8 227 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 C3orf14Q9HBI5 128 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 ZNF175Q9Y473 711 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 PTGDR2Q9Y5Y4 395 aa18.96■□□□□ 0.63
COL9A3-207ENST00000467819 RAI1Q7Z5J4 1906 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-207ENST00000467819 LINC01387J3KSC0 135 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 EMC8O43402 210 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 SEC22BO75396 215 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 KCNH1O95259 989 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 ANGPTL1O95841 491 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 IGKV1D-16P01601 117 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 INHBBP09529 407 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 CRYGSP22914 178 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 GPC1P35052 558 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 UGT2B10P36537 528 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 RPS3AP61247 264 aaKnown RBP18.95■□□□□ 0.62
COL9A3-207ENST00000467819 SGCBQ16585 318 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 GRAMD1BQ3KR37 738 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 ANKRD26P1Q6NSI1 321 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 APOOLQ6UXV4 268 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms