RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	POLR2I	P36954	125 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	CLK3	P49761	638 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	GTF2A1	P52655	376 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	DCD	P81605	110 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	PIN1	Q13526	163 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	KEAP1	Q14145	624 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	IL11RA	Q14626	422 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	SF3A2	Q15428	464 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	NSDHL	Q15738	373 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	MAPK14	Q16539	360 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	CT45A2	Q5DJT8	189 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	ZNF385C	Q66K41	422 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	PLEKHM3	Q6ZWE6	761 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	THAP5	Q7Z6K1	395 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	ZNF321P	Q8N8H1	164 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	BMPER	Q8N8U9	685 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	AQP11	Q8NBQ7	271 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	PLPP5	Q8NEB5	264 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	PMM1	Q92871	262 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	SENP5	Q96HI0	755 aa	Predicted RBP	11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	NIPSNAP1	Q9BPW8	284 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	ING2	Q9H160	280 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	ZNF556	Q9HAH1	456 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	C11orf16	Q9NQ32	467 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	CTPS2	Q9NRF8	586 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	KCNE5	Q9UJ90	142 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	CBLC	Q9ULV8	474 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	CFL2	Q9Y281	166 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	OR10H1	Q9Y4A9	318 aa		11.4	□□□□□ -0.58
HDLBP-231	ENST00000467435	CLDN24	A6NM45	220 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	CPSF4L	A6NMK7	179 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	POLR1C	O15160	346 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	IGKV1D-16	P01601	117 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	IGKV3-11	P04433	115 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	ZGLP1	P0C6A0	271 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	NUBP1	P53384	320 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	UGT2B15	P54855	530 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	SLC37A1	P57057	533 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	APOF	Q13790	326 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	SEC23B	Q15437	767 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	KCTD21	Q4G0X4	260 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	MRPL2	Q5T653	305 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	FAAH2	Q6GMR7	532 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	SHISA6	Q6ZSJ9	500 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	LANCL3	Q6ZV70	420 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	LAPTM4B	Q86VI4	370 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	NAXD	Q8IW45	347 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	ZNF614	Q8N883	585 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	BCORP1	Q8N888	145 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	SETD9	Q8NE22	299 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	ZNF721	Q8TF20	911 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	DAZL	Q92904	295 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	GTPBP3	Q969Y2	492 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	SLC46A1	Q96NT5	459 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	PITX2	Q99697	317 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	MCHR1	Q99705	422 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	FUZ	Q9BT04	418 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	G6PC3	Q9BUM1	346 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	EDEM2	Q9BV94	578 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	MRPS26	Q9BYN8	205 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	GRIP2	Q9C0E4	1043 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	ARMC7	Q9H6L4	198 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	RXFP3	Q9NSD7	469 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	MAN2C1	Q9NTJ4	1040 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	PCDHGA10	Q9Y5H3	936 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435	GMPPB	Q9Y5P6	360 aa		11.39	□□□□□ -0.59
HDLBP-231	ENST00000467435		A0A1W2PRQ8	180 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	SH3PXD2B	A1X283	911 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	CDHR4	A6H8M9	788 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	FRG2C	A6NGY1	282 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	CDX4	O14627	284 aa	Predicted RBP	11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	OR10H3	O60404	316 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	TPST2	O60704	377 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	ONECUT2	O95948	504 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	ADA	P00813	363 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	HEXB	P07686	556 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	ZNF806	P0C7X5	589 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	CD59	P13987	128 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	POU2F1	P14859	743 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	CCKBR	P32239	447 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	IFNA8	P32881	189 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	RNF144A	P50876	292 aa	Predicted RBP	11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	RPS6KA3	P51812	740 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	PSMD4	P55036	377 aa	Known RBP	11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	FOXL2	P58012	376 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	HOXC5	Q00444	222 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	IL5RA	Q01344	420 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	MC2R	Q01718	297 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	NPRL3	Q12980	569 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	RAPSN	Q13702	412 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	DGCR6	Q14129	220 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	ENTPD8	Q5MY95	495 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	PDZK1	Q5T2W1	519 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	PODNL1	Q6PEZ8	512 aa		11.38	□□□□□ -0.59
HDLBP-231	ENST00000467435	RBM44	Q6ZP01	1051 aa	Known RBP	11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms