RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 CDC123O75794 336 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PIGNO95427 931 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 KRT6AP02538 564 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 APOA1P02647 267 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SBK2P0C263 348 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 FRMD6-AS1P0C7T7 363 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 STAG3L2P0CL84 134 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SLC2A3P11169 496 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ZNF26P17031 533 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PTNP21246 168 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ATP6V1C1P21283 382 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 MSR1P21757 451 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 HOXA9P31269 272 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SLC6A6P31641 620 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 FCGR2BP31994 310 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 GRIA1P42261 906 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 NKX2-1P43699 371 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 CSNK1EP49674 416 aaKnown RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 CEBPDP49716 269 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 DAOAP59103 153 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 CDK3Q00526 305 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 FADDQ13158 208 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 TNK1Q13470 666 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PDK3Q15120 406 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PON2Q15165 354 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SLC5A12Q1EHB4 618 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ALKBH6Q3KRA9 238 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ADPRMQ3LIE5 342 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 MLIPQ5VWP3 458 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PRAMEF7Q5VXH5 474 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SPECC1LQ69YQ0 1117 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 TWF2Q6IBS0 349 aaKnown RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SLC25A25Q6KCM7 469 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SCYL2Q6P3W7 929 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 BHLHB9Q6PI77 547 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ZNF497Q6ZNH5 498 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 TMEM26Q6ZUK4 368 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 STXBP4Q6ZWJ1 553 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 NOTCH2NLQ7Z3S9 236 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PIGWQ7Z7B1 504 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 AQP12AQ8IXF9 295 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 GPRC5AQ8NFJ5 357 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 OR2T6Q8NHC8 308 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SCFD1Q8WVM8 642 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 CACNG8Q8WXS5 425 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SUSD6Q92537 303 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 HAS2Q92819 552 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 RAB1CQ92928 201 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 FAM46BQ96A09 425 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 NXNL1Q96CM4 212 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SPDL1Q96EA4 605 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 CHMP6Q96FZ7 201 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PRRC1Q96M27 445 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SPAG8Q99932 426 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 CITED1Q99966 193 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 LMF2Q9BU23 707 aaKnown RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ALG12Q9BV10 488 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 FICDQ9BVA6 458 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SPATA16Q9BXB7 569 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 IDI2Q9BXS1 227 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 NAPBQ9H115 298 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 WDR13Q9H1Z4 485 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 RGCCQ9H4X1 137 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ACTR8Q9H981 624 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 ROPN1Q9HAT0 212 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 FGF22Q9HCT0 170 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 APMAPQ9HDC9 416 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 CHST11Q9NPF2 352 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PPANQ9NQ55 473 aaKnown RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 INTS9Q9NV88 658 aaKnown RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 POLLQ9UGP5 575 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 DCDC2Q9UHG0 476 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 GGA2Q9UJY4 613 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 GPR132Q9UNW8 380 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 FOXA2Q9Y261 457 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 MRPS33Q9Y291 106 aaKnown RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 KLF2Q9Y5W3 355 aaPredicted RBP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 PUS1Q9Y606 427 aaKnown RBP eCLIP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 SF3B1O75533 1304 aaKnown RBP eCLIP3.15□□□□□ -1.91
CCDC58-203ENST00000466854 TRIOBPQ9H2D6 2365 aa3.15□□□□□ -1.91
CCDC58-203ENST00000466854 POLR3AO14802 1390 aaPredicted RBP3.14□□□□□ -1.91
CCDC58-203ENST00000466854 MYOM3Q5VTT5 1437 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 SPATA31E1Q6ZUB1 1445 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 FAM240BA0A1B0GVZ2 78 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 MBLAC1A4D2B0 266 aaPredicted RBP3.14□□□□□ -1.91
CCDC58-203ENST00000466854 TMEM210A6NLX4 147 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 HEPACAM2A8MVW5 462 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 WASH3PC4AMC7 463 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 SLCO1B7G3V0H7 640 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 GOLGA8TH3BQL2 631 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 GAPDHSO14556 408 aaPredicted RBP3.14□□□□□ -1.91
CCDC58-203ENST00000466854 DFNA5O60443 496 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 FCGR3BO75015 233 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 VPS26AO75436 327 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 PRKRAO75569 313 aaKnown RBP3.14□□□□□ -1.91
CCDC58-203ENST00000466854 UPK3AO75631 287 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 UFL1O94874 794 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 MT-ND1P03886 318 aa3.14□□□□□ -1.91
CCDC58-203ENST00000466854 UGT2B4P06133 528 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms