RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 TFECO14948 347 aaPredicted RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 AKAP8O43823 692 aaKnown RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 OR5F1O95221 314 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 ZIC2O95409 532 aaPredicted RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 GDI1P31150 447 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 FGF9P31371 208 aaPredicted RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 PUS10Q3MIT2 529 aaKnown RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 HEPHL1Q6MZM0 1159 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 CDC73Q6P1J9 531 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 MBOAT2Q6ZWT7 520 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 VN1R4Q7Z5H5 301 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 PAQR7Q86WK9 346 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 OR2T33Q8NG76 320 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 OR6F1Q8NGZ6 308 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 OR4Q3Q8NH05 313 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 TMEM255BQ8WV15 326 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 SLC35B4Q969S0 331 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 MED17Q9NVC6 651 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D29Q9UFV1 150 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 IL20RAQ9UHF4 553 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 SNRNP200O75643 2136 aaKnown RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 NDUFS1P28331 727 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 TNFRSF17Q02223 184 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 COL9A2Q14055 689 aaPredicted RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 PGGHGQ32M88 737 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 AADACL4Q5VUY2 407 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF620Q6ZNG0 422 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 DGLUCYQ7Z3D6 616 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 KLHL36Q8N4N3 616 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 OTULINQ96BN8 352 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 TMED9Q9BVK6 235 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 SRMSQ9H3Y6 488 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D17Q9HA65 648 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 POLMQ9NP87 494 aaPredicted RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 DDX28Q9NUL7 540 aaKnown RBP17.12■□□□□ 0.33
SYNE4-204ENST00000465425 PHF11Q9UIL8 331 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 SLC7A7Q9UM01 511 aa17.12■□□□□ 0.33
SYNE4-204ENST00000465425 CCDC182A6NF36 153 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 GRXCR1A8MXD5 290 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 SOX18P35713 384 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 CD79BP40259 229 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 ADPRHP54922 357 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 ASAH1Q13510 395 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 SUZ12Q15022 739 aaKnown RBP17.11■□□□□ 0.33
SYNE4-204ENST00000465425 ITPRIPL2Q3MIP1 535 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 TOR1AIP2Q8NFQ8 470 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 OR4K14Q8NGD5 310 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 ZCCHC10Q8TBK6 192 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 SLC22A18Q96BI1 424 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 C10orf90Q96M02 699 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 SLC6A17Q9H1V8 727 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 COMMD3Q9UBI1 195 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 CSNK1G3Q9Y6M4 447 aa17.11■□□□□ 0.33
SYNE4-204ENST00000465425 TRDV1A0A1B0GX56 115 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 PIP5K1CO60331 668 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 HLA-DPB1P04440 258 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 CSF3P09919 207 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 NDUFV2P19404 249 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 CELP19835 753 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 TLX1P31314 330 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-204ENST00000465425 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.33
SYNE4-204ENST00000465425 CD200R1LQ6Q8B3 271 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 RD3Q7Z3Z2 195 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 SECISBP2Q96T21 854 aaKnown RBP17.1■□□□□ 0.33
SYNE4-204ENST00000465425 PHOX2BQ99453 314 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 COQ7Q99807 217 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 CDH10Q9Y6N8 788 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 UNC80Q8N2C7 3258 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 POLR1CO15160 346 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-204ENST00000465425 THY1P04216 161 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 HMGN1P05114 100 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 PTNP21246 168 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 AK4P27144 223 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-204ENST00000465425 GCGRP47871 477 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 CAV3P56539 151 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 PPP3R1P63098 170 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 DEFB134Q4QY38 66 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 EIPR1Q53HC9 387 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 ATAD3CQ5T2N8 411 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 GATAD2AQ86YP4 633 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 OR4N5Q8IXE1 308 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 KIAA1143Q96AT1 154 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-204ENST00000465425 HDHD5Q9BXW7 423 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
SYNE4-204ENST00000465425 MEIOCA2RUB1 952 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 NARSO43776 548 aaKnown RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 LALBAP00709 142 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 HTR1FP30939 366 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 GPR68Q15743 365 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 CCDC92Q53HC0 331 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 ENPP7Q6UWV6 458 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF836Q6ZNA1 936 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 RANBP3LQ86VV4 465 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 Q8N9G6 341 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF485Q8NCK3 441 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 NT5CQ8TCD5 201 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 SCARF2Q96GP6 870 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 MMP28Q9H239 520 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms