RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PEX11GQ96HA9 241 aa20.25■□□□□ 0.83
PDLIM2-216ENST00000464275 AHCYL2Q96HN2 611 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-216ENST00000464275 DACH2Q96NX9 599 aa20.25■□□□□ 0.83
PDLIM2-216ENST00000464275 SAP130Q9H0E3 1048 aa20.25■□□□□ 0.83
PDLIM2-216ENST00000464275 POLR2J3Q9H1A7 115 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-216ENST00000464275 PRDM6Q9NQX0 595 aa20.25■□□□□ 0.83
PDLIM2-216ENST00000464275 OSGIN1Q9UJX0 560 aa20.25■□□□□ 0.83
PDLIM2-216ENST00000464275 TRIOO75962 3097 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 AP3D1O14617 1153 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 CDK1P06493 297 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 CCNYL3P0C7X3 344 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 POU1F1P28069 291 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 AVPR1BP47901 424 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 FNTBP49356 437 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 ALDH6A1Q02252 535 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 SLC13A2Q13183 592 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 TRAM2Q15035 370 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 EIPR1Q53HC9 387 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 TUBA3EQ6PEY2 450 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 VWA5B2Q8N398 1253 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 CLIP4Q8N3C7 705 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 OR4K5Q8NGD3 323 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 RHNO1Q9BSD3 238 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 ANKRD19PQ9H560 264 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 PRTFDC1Q9NRG1 225 aa20.24■□□□□ 0.83
PDLIM2-216ENST00000464275 A0A1B0GVT2 93 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 FITM1A5D6W6 292 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 TPST2O60704 377 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CYP7B1O75881 506 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CBX7O95931 251 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 RGS8P57771 180 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 VBP1P61758 197 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 IGLV3-21P80748 117 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 ST3GAL3Q11203 375 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 STX4Q12846 297 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 NKAIN2Q5VXU1 208 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 TMEM236Q5W0B7 351 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 C1orf94Q6P1W5 598 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 ZNF836Q6ZNA1 936 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 NLGN4XQ8N0W4 816 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CARFQ8N187 725 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 C9orf43Q8TAL5 461 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 GPR151Q8TDV0 419 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 HOXB13Q92826 284 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 PMM1Q92871 262 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 ZHX1-C8orf76Q96EF9 292 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 RBCK1Q9BYM8 510 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 DAPK2Q9UIK4 370 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 AGAP5A6NIR3 686 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 EFCAB9A8MZ26 197 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CLDN4O14493 209 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 FRS3O43559 492 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 NUDT21O43809 227 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 MAN1A2O60476 641 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 DBIP07108 87 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 RPS4Y1P22090 263 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CD40LGP29965 261 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CNR2P34972 360 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 POU6F2P78424 691 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 GPR68Q15743 365 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CCNJQ5T5M9 372 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 SLX4IPQ5VYV7 408 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 DGAT2L6Q6ZPD8 337 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 ZBTB46Q86UZ6 589 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 GALNT12Q8IXK2 581 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 PIK3R3Q92569 461 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 DIO2Q92813 273 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CRELD1Q96HD1 420 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 SLIRPQ9GZT3 109 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 MMP27Q9H306 513 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CTPS2Q9NRF8 586 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 NDOR1Q9UHB4 597 aa20.23■□□□□ 0.83
PDLIM2-216ENST00000464275 CPSF4LA6NMK7 179 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 HRO43593 1189 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 NKX2-2O95096 273 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 MMP11P24347 488 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 OR1D5P58170 312 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 EEF1A1P68104 462 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 ZNF155Q12901 538 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 GRM7Q14831 915 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 INAQ16352 499 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 MAMSTRQ6ZN01 415 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 OR52R1Q8NGF1 315 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 MMABQ96EY8 250 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 SPRTNQ9H040 489 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 POLE3Q9NRF9 147 aa20.22■□□□□ 0.83
PDLIM2-216ENST00000464275 IGHV1OR21-1A0A087WYE8 117 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 SH3D21A4FU49 640 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 H0YIG0 161 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 GSTM3P21266 225 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 GABRA3P34903 492 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 IFNGR2P38484 337 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 CLK1P49759 484 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 PSMD7P51665 324 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 MAT1AQ00266 395 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 ENTPD8Q5MY95 495 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 PTCHD4Q6ZW05 846 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 USP43Q70EL4 1123 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 ZER1Q7Z7L7 766 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 SLC25A45Q8N413 288 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms