RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 MSTNO14793 375 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 AZIN1O14977 448 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 RGS14O43566 566 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 SCO2O43819 266 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 TNFRSF21O75509 655 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 TGM6O95932 706 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 NEFHP12036 1026 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 CD99P14209 185 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 KRT4P19013 534 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 HK1P19367 917 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 MAP3K8P41279 467 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 CPA2P48052 419 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 OCRLQ01968 901 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 VPS26BQ4G0F5 336 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 LUZP2Q86TE4 346 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 GCNT2Q8N0V5 402 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 MEIOBQ8N635 442 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 CEP70Q8NHQ1 597 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 EGLN2Q96KS0 407 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 YIPF4Q9BSR8 244 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 LRTM1Q9HBL6 345 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 MED11Q9P086 117 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 NTMQ9P121 344 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 PLEKHA6Q9Y2H5 1048 aa12.98□□□□□ -0.33
SNRNP40-203ENST00000463988 SH3D21A4FU49 640 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 SLC22A20A6NK97 555 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 C17orf51A8MQB3 221 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 PDPK1O15530 556 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 TRIM13O60858 407 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 KCNH1O95259 989 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 CHEK2O96017 543 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 RAF1P04049 648 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 PRPS2P11908 318 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 GABRA3P34903 492 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 PRR5P85299 388 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 C17orf67Q0P5P2 114 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 RAET1LQ5VY80 246 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 FBXW10Q5XX13 1052 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 CLEC6AQ6EIG7 209 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 Q6ZSR9 355 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 P4HA3Q7Z4N8 544 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 ZFP28Q8NHY6 868 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 DUSP19Q8WTR2 217 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 SMPDL3BQ92485 455 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 STARD4Q96DR4 205 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 C1GALT1C1Q96EU7 318 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 ZBED6CLQ96FA7 236 aaPredicted RBP12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 RTN4RQ9BZR6 473 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 C12orf65Q9H3J6 166 aaKnown RBP12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 REEP4Q9H6H4 257 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 PLEKHF2Q9H8W4 249 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 MKS1Q9NXB0 559 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 NDRG3Q9UGV2 375 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 TMED5Q9Y3A6 229 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 ZNF337Q9Y3M9 751 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 ZNF175Q9Y473 711 aa12.97□□□□□ -0.33
SNRNP40-203ENST00000463988 OR2M5A3KFT3 312 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 NKX2-2O95096 273 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 UTS2O95399 124 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 HRGP04196 525 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 NGFRP08138 427 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 FGF4P08620 206 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 FRKP42685 505 aaPredicted RBP12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 CLDN15P56746 228 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 PPP2R2AP63151 447 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 HSPB3Q12988 150 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 STX5Q13190 355 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 PDE7AQ13946 482 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 FGFBP1Q14512 234 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 KANK2Q63ZY3 851 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 PLXDC2Q6UX71 529 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 MARCH3Q86UD3 253 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 C10orf107Q8IVU9 208 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 CDRT4Q8N9R6 151 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 LRRN4CLQ8ND94 238 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 EPS8L3Q8TE67 593 aaKnown RBP12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 PPCDCQ96CD2 204 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 MTERF3Q96E29 417 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 GATA5Q9BWX5 397 aaPredicted RBP12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 TBL1XR1Q9BZK7 514 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 PTGDR2Q9Y5Y4 395 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 AP4B1Q9Y6B7 739 aa12.96□□□□□ -0.33
SNRNP40-203ENST00000463988 SMIM23A6NLE4 172 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 ALG1L2C9J202 215 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 CASKO14936 926 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 EMC8O43402 210 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 ATE1O95260 518 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 ANGPTL1O95841 491 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 DDX5P17844 614 aaKnown RBP12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 SDC1P18827 310 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 KLK2P20151 261 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 LCN1P31025 176 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 GPC1P35052 558 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 ASMTP46597 345 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 SUCLG1P53597 346 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms