RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ANKRD28O15084 1053 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 ZIC3O60481 467 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 HMGN2P05204 90 aaKnown RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 TCEA1P23193 301 aaKnown RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 CHRNB4P30926 498 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 RPL3P39023 403 aaKnown RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 HBA1P69905 142 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 MAD2L1Q13257 205 aaPredicted RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 SMU1Q2TAY7 513 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 PGS1Q32NB8 556 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 FIGNL1Q6PIW4 674 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 OR4C3Q8NH37 302 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 OR14L1PQ8NHC6 308 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 FAM110BQ8TC76 370 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 DUSP19Q8WTR2 217 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 OR5P2Q8WZ92 322 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 ABTB1Q969K4 478 aaPredicted RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 DUSP26Q9BV47 211 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 OR2B2Q9GZK3 357 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 PRDM14Q9GZV8 571 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 MEAF6Q9HAF1 191 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 TAS2R10Q9NYW0 307 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 MARCOQ9UEW3 520 aaPredicted RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 SDHDO14521 159 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 HNRNPRO43390 633 aaKnown RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 KCNK2O95069 426 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 KCNH1O95259 989 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 UTS2O95399 124 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 ALDOCP09972 364 aaKnown RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 GABRA1P14867 456 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 CCT3P49368 545 aaKnown RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 GFRA1P56159 465 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 PHC1P78364 1004 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 TFF3Q07654 80 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 STX5Q13190 355 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 LASP1Q14847 261 aaKnown RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 GRAMD1BQ3KR37 738 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 ACSF3Q4G176 576 aaPredicted RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 CCNJQ5T5M9 372 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 OR4F3Q6IEY1 312 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 CAMKMTQ7Z624 323 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 CLECL1Q8IZS7 167 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 FADS6Q8N9I5 356 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 PRPF18Q99633 342 aaKnown RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 BHLHE41Q9C0J9 482 aaPredicted RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 DSN1Q9H410 356 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 WDR55Q9H6Y2 383 aaPredicted RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 ATAD3AQ9NVI7 634 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 THAP1Q9NVV9 213 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 FAM120CQ9NX05 1096 aaKnown RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 MED11Q9P086 117 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 CAMK2AQ9UQM7 478 aa11.78□□□□□ -0.52
XRN1-203ENST00000463916 RPH3AQ9Y2J0 694 aaPredicted RBP11.78□□□□□ -0.52
XRN1-203ENST00000463916 ARHGAP21Q5T5U3 1957 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 FAM90A27PA6NNH2 459 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 AHRRA9YTQ3 701 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 KITP10721 976 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 SRD5A2P31213 254 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 STARP49675 285 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 PRR5P85299 388 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 VPS26BQ4G0F5 336 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 WDR75Q8IWA0 830 aaKnown RBP11.77□□□□□ -0.52
XRN1-203ENST00000463916 CLEC4FQ8N1N0 589 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 NAXEQ8NCW5 288 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 OR2M3Q8NG83 312 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 OR5AK3PQ8NH89 298 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 ASB5Q8WWX0 329 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 JADE3Q92613 823 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 TEX37Q96LM6 180 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 MANSC1Q9H8J5 431 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.52
XRN1-203ENST00000463916 GPATCH2Q9NW75 528 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 PPP4R1LQ9P1A2 415 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 MRTO4Q9UKD2 239 aaKnown RBP11.77□□□□□ -0.52
XRN1-203ENST00000463916 ABCG2Q9UNQ0 655 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 KCNE3Q9Y6H6 103 aa11.77□□□□□ -0.52
XRN1-203ENST00000463916 TTC36A6NLP5 189 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 SCN2BO60939 215 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 EPPINO95925 133 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 HOXD4P09016 255 aaPredicted RBP11.77□□□□□ -0.53
XRN1-203ENST00000463916 LBPP18428 481 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 DPP4P27487 766 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 EPHA3P29320 983 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 B3GALT5-AS1P59052 145 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 OCRLQ01968 901 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 ZCCHC12Q6PEW1 402 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 PLXDC2Q6UX71 529 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 IFNEQ86WN2 208 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 TNIP2Q8NFZ5 429 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 CDS1Q92903 461 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 G6PC3Q9BUM1 346 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 NKIRAS1Q9NYS0 192 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 PDZD2O15018 2839 aa11.77□□□□□ -0.53
XRN1-203ENST00000463916 HCFC1P51610 2035 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 GOLGA8QA0A0J9YX86 632 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 GOLGA8OA6NCC3 632 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 GOLGA8NF8WBI6 632 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 CFLARO15519 480 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 ACTL6AO96019 429 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms